BO34783.complete Sequence
499 bp assembled on 2013-10-29
GenBank Submission: KX798971
> BO34783.complete
GAAGTTATCAGTCGACATGTACGTGCCTCGAACTGCAACGACAGCTGCTC
CTGCCCCAGTTACCCGGAACCAGGATTCTGGATCCTGGATCCAGCGCCCA
GTACCCAGGATTCAGAATCCAGAACCCAGAACCCAGAATCCAGCCTCCAC
TTTGGGACCCTGTGTGCGCATATATATTTATTCCATGTACATATTCTTGC
ACGTCGCAAAAGAGCAGAGGTCCGGGGAAAAGGACACGGGACGCAGGTCT
GAGCACTCCGGACAAAGGGTGACTGCTGCCGTTTATTGTCCTGCTCCTGC
TTCTGCTCCGGCTCCTGCGAATGGCGGAGCACTGGAGCTGTGGAGAAACG
TGGCCGGGCAAGTGACCCAGAAAGTACCAGTAACCAGCAATAAATGGCAA
TATTTGATGGATTACTTGAGCGTTACTTTGACTTGCCAACGAAAAGAAGA
GTATAATTTTATCGTGTTTGTGGGCGGACGTGCAAGCTTTCTAGACCAT
BO34783.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 14:32:00 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 14:32:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20865386..20865671 | 196..481 | 1430 | 100 | Plus |
X | 23542271 | X | 20865152..20865331 | 16..195 | 900 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:31:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 1079..1122 | 317..274 | 112 | 72.7 | Minus |
BO34783.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:47:24 Download gff for
BO34783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43193-RA | 341..805 | 17..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:19 Download gff for
BO34783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20865153..20865331 | 17..195 | 100 | -> | Plus |
X | 20865386..20865671 | 196..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:19 Download gff for
BO34783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20865153..20865331 | 17..195 | 100 | -> | Plus |
X | 20865386..20865671 | 196..483 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:47:24 Download gff for
BO34783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20736180..20736358 | 17..195 | 100 | -> | Plus |
arm_X | 20736413..20736698 | 196..483 | 99 | | Plus |
BO34783.pep Sequence
Translation from 16 to 499
> BO34783.pep
MYVPRTATTAAPAPVTRNQDSGSWIQRPVPRIQNPEPRTQNPASTLGPCV
RIYIYSMYIFLHVAKEQRSGEKDTGRRSEHSGQRVTAAVYCPAPASAPAP
ANGGALELWRNVAGQVTQKVPVTSNKWQYLMDYLSVTLTCQRKEEYNFIV
FVGGRASFLDH
Sequence BO34783.pep has no blast hits.