Clone BO34783 Report

Search the DGRC for BO34783

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:347
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG43193-RA
Protein status:BO34783.pep: Imported from assembly
Sequenced Size:499

Clone Sequence Records

BO34783.complete Sequence

499 bp assembled on 2013-10-29

GenBank Submission: KX798971

> BO34783.complete
GAAGTTATCAGTCGACATGTACGTGCCTCGAACTGCAACGACAGCTGCTC
CTGCCCCAGTTACCCGGAACCAGGATTCTGGATCCTGGATCCAGCGCCCA
GTACCCAGGATTCAGAATCCAGAACCCAGAACCCAGAATCCAGCCTCCAC
TTTGGGACCCTGTGTGCGCATATATATTTATTCCATGTACATATTCTTGC
ACGTCGCAAAAGAGCAGAGGTCCGGGGAAAAGGACACGGGACGCAGGTCT
GAGCACTCCGGACAAAGGGTGACTGCTGCCGTTTATTGTCCTGCTCCTGC
TTCTGCTCCGGCTCCTGCGAATGGCGGAGCACTGGAGCTGTGGAGAAACG
TGGCCGGGCAAGTGACCCAGAAAGTACCAGTAACCAGCAATAAATGGCAA
TATTTGATGGATTACTTGAGCGTTACTTTGACTTGCCAACGAAAAGAAGA
GTATAATTTTATCGTGTTTGTGGGCGGACGTGCAAGCTTTCTAGACCAT

BO34783.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 14:32:00 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 14:32:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20865386..20865671 196..481 1430 100 Plus
X 23542271 X 20865152..20865331 16..195 900 100 Plus
Blast to na_te.dros performed 2014-11-28 14:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1079..1122 317..274 112 72.7 Minus

BO34783.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:47:24 Download gff for BO34783.complete
Subject Subject Range Query Range Percent Splice Strand
CG43193-RA 341..805 17..483 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:19 Download gff for BO34783.complete
Subject Subject Range Query Range Percent Splice Strand
X 20865153..20865331 17..195 100 -> Plus
X 20865386..20865671 196..483 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:16:19 Download gff for BO34783.complete
Subject Subject Range Query Range Percent Splice Strand
X 20865153..20865331 17..195 100 -> Plus
X 20865386..20865671 196..483 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:47:24 Download gff for BO34783.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20736180..20736358 17..195 100 -> Plus
arm_X 20736413..20736698 196..483 99   Plus

BO34783.pep Sequence

Translation from 16 to 499

> BO34783.pep
MYVPRTATTAAPAPVTRNQDSGSWIQRPVPRIQNPEPRTQNPASTLGPCV
RIYIYSMYIFLHVAKEQRSGEKDTGRRSEHSGQRVTAAVYCPAPASAPAP
ANGGALELWRNVAGQVTQKVPVTSNKWQYLMDYLSVTLTCQRKEEYNFIV
FVGGRASFLDH
Sequence BO34783.pep has no blast hits.