BO34801.complete Sequence
1357 bp assembled on 2013-10-29
GenBank Submission: KX795730
> BO34801.complete
GAAGTTATCAGTCGACATGAATAAATGTCCTCGCTGCAACTGCGATGCTA
CAGGACAGAATCGCCTCGTCACCGACAGCTGTGGACACACCAAGTGTCGT
CTCTGCCTGGTGGCGGATGTATCGGATTGCCTGGAATGTCGAGTTGCACG
AAGTGTCGATATCCAGGAGACACAGGAAACGCAAGCAAGGACGTCGGCTG
ATAAGCGAATAATTGTCACAGATAAGGGCTACCACTGTACCGTCTGCAAT
AAGGATTTTCGCAGCCGGACCCAGCAGTATTACCACCTCACCTGCGGCAA
CGATCTTCTCAAGAAGTTCAACTGCAAGGAGTGCGGACGCAGATTTGCTA
CCAGTTCACATTTAAAGTACCATCTAATGAGCCATGAGAAACAATCAAAA
CACTCGTGCAGCGTCTGCCACAAAAGTTTCAAGCAACCAATTGTTCTACA
GCGCCACATGCTTACCCACAACCAGGAGAAGCATTTGTGCCCAATCTGCC
AGAAGGTTTTCCGCCGCAAGAGCTCTCTTGCCAGCCACCTGGCGATCCAC
AGCGATCTCGGCCTGCAATTTAAATGCGAGCTCTGCTCTAAGCATTTCCA
GAACAAGGCCAATTTGAACCAGCATCTGCGGAAACACGACAAGAACAATA
TTCGGCACATGTGTAAAGTGTGCCAGAAGTCCTTTCTGCGACAAACCACG
CTTCGGCTGCACATGAAGCGCCACTCAAATCGCGAACGTCAGTCCTGTTC
CCTGTGCGGCAAAAGCTACAATGATCCGGATGCTCTGGGCCGACATTTAA
GACAACACAAGACTGCCGAACGCTACCGCTGTATCCAATGTGACATCACT
ATCAACCGAAAGGACAACATGCTGCGACATCTGCGATCCATGCACCCTGG
TTGTGCGTTTGCCAGTACTGTTGAAATGGTTACACCGAGGTCCAGTGCTC
AGGAGGCCACGACGGCGGAAGAAAGACCATCTCAGACTGTAAGATACAAC
AGTGTGATCCAGAGTGTGGGCAACGTTGAGCCAGTGATGTTGCTGCAATC
TACGCCACTGCCATCTCAACTCCCTGAACTGCAGATGGAGAAAGGGAAAG
CTGTCCCAGAGCATCTGCCTCTGCCAGATGTAATGCCAGAGGAGAATGTC
CAGCTGTATCGCAAGATCATCTTGGATCTGGACAACGAGGAATACTCTAG
CGAACCTAGCCCCGATGCCCAAGAACCAGCCATGCAACATCACCAGCCGC
GTGTCCCGGGGCAAGGTAGCTCCAAATTTAGCGAGATGCACTGGCGCAAG
AATTTCAAATATTGGTACCAAAAAGAAGAAAACACAAAGGCAAGCTTTCT
AGACCAT
BO34801.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:09:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42726-RA | 1326 | CG42726-PA | 1..1323 | 17..1339 | 6615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42727-RA | 2285 | CG42727-RA | 72..1394 | 17..1339 | 6615 | 100 | Plus |
| CG42726-RA | 2285 | CG42726-RA | 72..1394 | 17..1339 | 6615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:09:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15348502..15349500 | 341..1339 | 4995 | 100 | Plus |
| 3R | 32079331 | 3R | 15348119..15348442 | 17..340 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:09:38 has no hits.
BO34801.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-29 16:44:27 Download gff for
BO34801.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42727-RA | 72..1383 | 17..1328 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:21 Download gff for
BO34801.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42726-RA | 72..1383 | 17..1328 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:21 Download gff for
BO34801.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15348119..15348442 | 17..340 | 100 | -> | Plus |
| 3R | 15348502..15349489 | 341..1328 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-29 16:44:27 Download gff for
BO34801.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11173841..11174164 | 17..340 | 100 | -> | Plus |
| arm_3R | 11174224..11175211 | 341..1328 | 100 | | Plus |
BO34801.pep Sequence
Translation from 16 to 1357
> BO34801.pep
MNKCPRCNCDATGQNRLVTDSCGHTKCRLCLVADVSDCLECRVARSVDIQ
ETQETQARTSADKRIIVTDKGYHCTVCNKDFRSRTQQYYHLTCGNDLLKK
FNCKECGRRFATSSHLKYHLMSHEKQSKHSCSVCHKSFKQPIVLQRHMLT
HNQEKHLCPICQKVFRRKSSLASHLAIHSDLGLQFKCELCSKHFQNKANL
NQHLRKHDKNNIRHMCKVCQKSFLRQTTLRLHMKRHSNRERQSCSLCGKS
YNDPDALGRHLRQHKTAERYRCIQCDITINRKDNMLRHLRSMHPGCAFAS
TVEMVTPRSSAQEATTAEERPSQTVRYNSVIQSVGNVEPVMLLQSTPLPS
QLPELQMEKGKAVPEHLPLPDVMPEENVQLYRKIILDLDNEEYSSEPSPD
AQEPAMQHHQPRVPGQGSSKFSEMHWRKNFKYWYQKEENTKASFLDH
BO34801.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42726-PA | 441 | CG42726-PA | 1..441 | 1..441 | 2401 | 100 | Plus |
| crol-PF | 907 | CG14938-PF | 301..526 | 68..295 | 366 | 31.9 | Plus |
| crol-PB | 891 | CG14938-PB | 301..525 | 68..295 | 365 | 31.4 | Plus |
| crol-PI | 962 | CG14938-PI | 301..525 | 68..295 | 365 | 31.4 | Plus |
| crol-PE | 962 | CG14938-PE | 301..525 | 68..295 | 365 | 31.4 | Plus |
| crol-PF | 907 | CG14938-PF | 223..442 | 74..295 | 354 | 35.3 | Plus |
| crol-PF | 907 | CG14938-PF | 277..498 | 72..295 | 347 | 31.1 | Plus |
| crol-PF | 907 | CG14938-PF | 361..583 | 72..295 | 332 | 29.2 | Plus |
| crol-PB | 891 | CG14938-PB | 223..469 | 74..295 | 329 | 31.2 | Plus |
| crol-PI | 962 | CG14938-PI | 223..469 | 74..295 | 329 | 31.2 | Plus |
| crol-PB | 891 | CG14938-PB | 417..638 | 72..295 | 327 | 29.3 | Plus |
| crol-PI | 962 | CG14938-PI | 417..638 | 72..295 | 327 | 29.3 | Plus |
| crol-PF | 907 | CG14938-PF | 389..612 | 72..295 | 322 | 31 | Plus |
| crol-PI | 962 | CG14938-PI | 473..726 | 72..294 | 306 | 28.8 | Plus |
| crol-PF | 907 | CG14938-PF | 418..671 | 72..294 | 303 | 28.8 | Plus |
| crol-PB | 891 | CG14938-PB | 445..667 | 72..295 | 295 | 29.2 | Plus |
| crol-PI | 962 | CG14938-PI | 445..667 | 72..295 | 295 | 29.2 | Plus |
| crol-PB | 891 | CG14938-PB | 221..436 | 129..289 | 228 | 26.1 | Plus |
| crol-PI | 962 | CG14938-PI | 221..436 | 129..289 | 228 | 26.1 | Plus |
| crol-PF | 907 | CG14938-PF | 221..357 | 156..295 | 219 | 33.6 | Plus |
| crol-PB | 891 | CG14938-PB | 221..357 | 156..295 | 219 | 33.6 | Plus |
| crol-PI | 962 | CG14938-PI | 221..357 | 156..295 | 219 | 33.6 | Plus |
| crol-PB | 891 | CG14938-PB | 529..684 | 72..224 | 215 | 31.4 | Plus |
| crol-PF | 907 | CG14938-PF | 554..669 | 68..178 | 161 | 30.2 | Plus |
| crol-PI | 962 | CG14938-PI | 609..724 | 68..178 | 161 | 30.2 | Plus |
