BO34831.complete Sequence
1918 bp assembled on 2014-03-03
GenBank Submission: KX796233
> BO34831.complete
GAAGTTATCAGTCGACATGGTTCGCCGGGCATCGAGTGTTCCTCATCTGA
ATAGTAGTGGCGGCAGCAGTGCGGACAGCGCCGGAACGTCGGGCAGTCGT
CGTGGTCGGGCTCCGGTGGCTGGCTCCCGCGGACGAAAGACGCCCTCGAC
CACATCCACCGGCCAGAGCCAGCGCCAGAGTTCCGGCAGCAGCAGCAGTA
TGCCACGATCACGAAGTCTGACCAATGGCATGCGTCGTCTTAGTCCACAA
AAGGGGACTGGCAGTAGCGGTGGCACCGGTGGAGGAGGAGGTAGCTCCCG
CAATACGCCGTATTTCCTGCGTTCACGCGAGAATGAGATTGGTAGCGCTG
ACACGCTGGAAATCGTGGCCTCCAAGTCCACGGGCAGCGAGGAGTGCTCA
ACGCCGGAGGACAATATTAACGTGGTTGTAAGAGTGCGTCCTTTAAACGA
CAAAGAGAAAAGGGATCGACATGGGTCCACGCTTCAGTTTCCTGGAAACG
GCCAGGTTATACTTGAAGGCAACGATGTGGGCCAGAAAAGGTCGCATAAT
CGCGATAGTGTACGGGTTTTCACCTATAACGTGGTATTTGAGCCGGGAGC
CACACAGGAGGATATTCTGGACTACTCGGGTATAAAGCGCATCATTGAAA
TGGGCATCGAGGGTTTCAGTTGCACGGCTTTTTGTTACGGCCAAACGGGA
TCCGGCAAAACGCACACCCTCACTGGACCCCCCGATTTGTTCGTTGGCAA
GCCGAATCCCAAGGATCCGCGTCATGGCCTCATCTTCCGCTCGTTTTTGT
ATCTCTTCCAATTGATTAAGAATCGCAAGGACGTCAATTACGTGCTAAAA
GCCTCCTTCATGGAAATCTACAATGAGCGGGTAATCGATTTGCTAAACCC
GGGAAGTGCACGAAAACCGTTGGCGGTGCGCTGGTCCAAGAAATCGGGTG
GTTTCTTCGTGGAGAACCTTTTCACGGTGGACTGCGAAGAATTGGATGAC
CTTCTGGCCGTACTGGAAGAAGGTATGAGAAATCGTGCTGTTGGCTCTCA
TGCCATGAACGACCACTCCTCACGTTCTCATACAATATTGACGGTCCACA
TCCTATCCGATCAGCAGACGGACGGTGGGGTGTTCCTTTCCAAGCACGGA
AAGATTAACTTCGTAGACCTGGCTGGCAGTGAGTTAACCAAGAAGACGAT
GAGCGAAGGGAAAACCCTAGAGGAAGCCAACAACATAAACAAGAGCCTTA
TGGTCCTCGGCTACTGTATCTCCTCGTTGAGCGATTCCAAGAAAAGGACG
GGTCACATTCCGTACCGAGATAGCCAGCTCACCAAGCTACTGGCCGACAG
TCTGGCGGGGAATGGTGTCACCTTGATGATCGCTTGCGTTTCCCCCGCCC
ACTATAATCATGCGGAAACCCTCAACACTCTGCGATATGCGTCGCGGGCG
AAGAGGATACGCACCAAGCCCGTGATAAAGATGGATCCGAGGGAGGCGCT
GATTCTCAGTCTAAAGCGTGACATCCATGCACTCCAAATGGAGAACGATC
ACCTGAAGGCGGCATTGAATCTTCATCATCAAGCAGCTCCAAATGGTGGG
CCGGTTGAGAATCTTCTGGAGCTTCAACTGGATCGAGTTAGCAGCGGTGG
CGGAGTACCAGTGCCCAAAGTTGATTTGCAGCGATTACCGGAGCTTGATG
GCTCCGAACTCGCCGAGCTTGTTAAGCTATACATGGTGGAGAACGAATCC
CTGAGGCAGGAGAATAATCATCTGTTCACCGTGCGGGAAACCATTCTTAG
GGATCAGGAGATAGTCTGCCGAGAAAACGAGCGCCTGCTTAAGAAGCTGG
AGGATGTCAATAAGACTGGCTCATTGTTCTCTCCCATTTCTGACTCGTTC
GCAAGCTTTCTAGACCAT
BO34831.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp54D-RA | 1887 | CG43323-PA | 1..1884 | 17..1900 | 9420 | 100 | Plus |
| Klp54D-RC | 1911 | CG43323-PC | 1..1848 | 17..1864 | 9240 | 100 | Plus |
| Klp54D-RB | 2175 | CG43323-PB | 1..1847 | 17..1863 | 9235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:58:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp54D-RA | 2278 | CG43323-RA | 184..2068 | 16..1900 | 9425 | 100 | Plus |
| Klp54D-RC | 2238 | CG43323-RC | 184..2032 | 16..1864 | 9245 | 100 | Plus |
| Klp54D-RB | 2359 | CG43323-RB | 184..2031 | 16..1863 | 9240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:58:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17561696..17562539 | 1021..1864 | 4220 | 100 | Plus |
| 2R | 25286936 | 2R | 17557214..17557535 | 16..337 | 1610 | 100 | Plus |
| 2R | 25286936 | 2R | 17560727..17560954 | 512..739 | 1140 | 100 | Plus |
| 2R | 25286936 | 2R | 17560497..17560671 | 337..511 | 875 | 100 | Plus |
| 2R | 25286936 | 2R | 17561018..17561163 | 739..884 | 730 | 100 | Plus |
| 2R | 25286936 | 2R | 17561477..17561622 | 880..1025 | 730 | 100 | Plus |
| 2R | 25286936 | 2R | 17562620..17562656 | 1864..1900 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:58:39 has no hits.
BO34831.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:23:43 Download gff for
BO34831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp54D-RA | 185..2068 | 17..1902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:19 Download gff for
BO34831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp54D-RA | 185..2068 | 17..1902 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:19 Download gff for
BO34831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17557215..17557534 | 17..336 | 100 | -> | Plus |
| 2R | 17560497..17560671 | 337..511 | 100 | -> | Plus |
| 2R | 17560727..17560954 | 512..739 | 100 | -> | Plus |
| 2R | 17561019..17561159 | 740..880 | 100 | -> | Plus |
| 2R | 17561478..17561619 | 881..1022 | 100 | -> | Plus |
| 2R | 17561698..17562538 | 1023..1863 | 100 | -> | Plus |
| 2R | 17562620..17562656 | 1864..1902 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:23:43 Download gff for
BO34831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13444720..13445039 | 17..336 | 100 | -> | Plus |
| arm_2R | 13448002..13448176 | 337..511 | 100 | -> | Plus |
| arm_2R | 13448232..13448459 | 512..739 | 100 | -> | Plus |
| arm_2R | 13448524..13448664 | 740..880 | 100 | -> | Plus |
| arm_2R | 13448983..13449124 | 881..1022 | 100 | -> | Plus |
| arm_2R | 13449203..13450043 | 1023..1863 | 100 | -> | Plus |
| arm_2R | 13450125..13450161 | 1864..1902 | 94 | | Plus |
BO34831.pep Sequence
Translation from 16 to 1918
> BO34831.pep
MVRRASSVPHLNSSGGSSADSAGTSGSRRGRAPVAGSRGRKTPSTTSTGQ
SQRQSSGSSSSMPRSRSLTNGMRRLSPQKGTGSSGGTGGGGGSSRNTPYF
LRSRENEIGSADTLEIVASKSTGSEECSTPEDNINVVVRVRPLNDKEKRD
RHGSTLQFPGNGQVILEGNDVGQKRSHNRDSVRVFTYNVVFEPGATQEDI
LDYSGIKRIIEMGIEGFSCTAFCYGQTGSGKTHTLTGPPDLFVGKPNPKD
PRHGLIFRSFLYLFQLIKNRKDVNYVLKASFMEIYNERVIDLLNPGSARK
PLAVRWSKKSGGFFVENLFTVDCEELDDLLAVLEEGMRNRAVGSHAMNDH
SSRSHTILTVHILSDQQTDGGVFLSKHGKINFVDLAGSELTKKTMSEGKT
LEEANNINKSLMVLGYCISSLSDSKKRTGHIPYRDSQLTKLLADSLAGNG
VTLMIACVSPAHYNHAETLNTLRYASRAKRIRTKPVIKMDPREALILSLK
RDIHALQMENDHLKAALNLHHQAAPNGGPVENLLELQLDRVSSGGGVPVP
KVDLQRLPELDGSELAELVKLYMVENESLRQENNHLFTVRETILRDQEIV
CRENERLLKKLEDVNKTGSLFSPISDSFASFLDH
BO34831.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:58:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp54D-PA | 628 | CG43323-PA | 1..628 | 1..628 | 3218 | 100 | Plus |
| Klp54D-PC | 636 | CG43323-PC | 1..617 | 1..617 | 3159 | 99.8 | Plus |
| Klp54D-PB | 724 | CG43323-PB | 1..616 | 1..616 | 3158 | 100 | Plus |
| Klp68D-PB | 784 | CG7293-PB | 5..370 | 119..507 | 640 | 37.9 | Plus |
| Klp68D-PA | 784 | CG7293-PA | 5..370 | 119..507 | 640 | 37.9 | Plus |
