Clone BO34907 Report

Search the DGRC for BO34907

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:349
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG31751-RA
Protein status:BO34907.pep: Imported from assembly
Sequenced Size:1285

Clone Sequence Records

BO34907.complete Sequence

1285 bp assembled on 2014-03-03

GenBank Submission: KX799728

> BO34907.complete
GAAGTTATCAGTCGACATGGAGCAGTGGAACAATGTGGAGCTGACGAACA
TGTCCAAAAAGTCGTATACCCTGAATCATGCCTACGATGCCGCCGAGAAG
TTGAACAAGGAAAACACGGCAAAGTCCTCGAATGGCAATGGCACCAGTGC
CGATGAATCAACAGCTGCAGATGGCGATCTCCTCAAGCCAGGATCGGACG
TGCGCCCAAAAGTGGAGCCCGAGGACGTGGAGAGCCTGCTGCGTCGCCTC
TACGGGATCACGATAAGCGAGGTTAAGGAAATCGTCGCCTACGACGATCG
CAACTTCTTTGTCAAGGAGGATAGTAATGTTAAGAACCCCCTCATTGTAA
CCCACTGTCCACACGGATACGTCCTGAAAATCCTCAACTCACTGGACTCT
AAGAAAGAGGACTTCGTGGATGCCCAAAACCAGATGCTGCTTTACTTGGG
AAAACACAGTGTGAAATGCCCACGACCAGTAGCCAATGCAACAGGAAAGT
ATTACTCTGTGGAACGGCTGAATGGGAATTCGAATGTGGTGCGACTGCTG
GAATTTATACCGGGAGAAATCTTCCACCAGGTGCCGGTGACGAAGCACCT
GCTCTACCGCAGCGGCGAATACTTGGCCAGGTTGGATCGAGCCCTCAAGA
ACTTCACCCACCAGGCATATGAAAGCCACAAGACCTTGTGGATGCTTCAG
AGTGTTCCCGAGCTTAGGCAATTCCTGTACGTGGTGAAGGATCAGGAGCA
GCGGCTTATCTGCGACGAGGTGATCGATGCCTTTGAAGCCAAGGTTCTGA
GCCAACTGCCATCCATGGAGCACCAGATCATCCATGGGGACTTCAACGAA
CAAAATATAGTGGTGGAGCAGGTGCCCAATCAAACTGAATATACCATCAA
GGGAGTTATTGATTTCGGTGATACGAGCAAATCGCCACTGATCTTCGAAA
TTGGAATTGCCCTCACTTATATGATACTGCAGGCCAACGATTTGGCCAAT
GGTGGCATATTTCTGTCCGGTTATACCAGTCTGAACCCAATTGAGAATTC
CGAGCTGGCCCTTCTCAAGTACTGTGTTACTGCCCGATTTGTTCAGAGCC
TGGTAATGGGACTCTACACCCACACGCTGCATCCCACAAATGAGTACCTC
CTGGTGACCCAGGAAAAGGGATGGAAGCTCCTTCAGAAGCTGTGGCGCGA
GAGCTTTGACGATATTGATGAGCTGTGGGCAAGCACTGGACACCAGTACT
TGACGCAGAGCAATAAAGCAAGCTTTCTAGACCAT

BO34907.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:59:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG31751-RC 1254 CG31751-PC 1..1251 17..1267 6255 100 Plus
CG31751-RB 1254 CG31751-PB 1..1251 17..1267 6255 100 Plus
CG31751-RA 1254 CG31751-PA 1..1251 17..1267 6255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG31751-RC 1902 CG31751-RC 268..1518 17..1267 6255 100 Plus
CG31751-RB 1842 CG31751-RB 139..1389 17..1267 6255 100 Plus
CG31751-RA 1971 CG31751-RA 268..1518 17..1267 6255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:59:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18682444..18683262 449..1267 4095 100 Plus
2L 23513712 2L 18678854..18679161 17..324 1540 100 Plus
2L 23513712 2L 18682263..18682390 323..450 640 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:59:13 has no hits.

BO34907.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:00 Download gff for BO34907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31751-RA 268..1518 17..1269 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:34 Download gff for BO34907.complete
Subject Subject Range Query Range Percent Splice Strand
CG31751-RA 268..1518 17..1269 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:34 Download gff for BO34907.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18678854..18679161 17..324 100 -> Plus
2L 18682265..18682389 325..449 100 -> Plus
2L 18682445..18683262 450..1269 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:00 Download gff for BO34907.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18678854..18679161 17..324 100 -> Plus
arm_2L 18682265..18682389 325..449 100 -> Plus
arm_2L 18682445..18683262 450..1269 99   Plus

BO34907.pep Sequence

Translation from 16 to 1285

> BO34907.pep
MEQWNNVELTNMSKKSYTLNHAYDAAEKLNKENTAKSSNGNGTSADESTA
ADGDLLKPGSDVRPKVEPEDVESLLRRLYGITISEVKEIVAYDDRNFFVK
EDSNVKNPLIVTHCPHGYVLKILNSLDSKKEDFVDAQNQMLLYLGKHSVK
CPRPVANATGKYYSVERLNGNSNVVRLLEFIPGEIFHQVPVTKHLLYRSG
EYLARLDRALKNFTHQAYESHKTLWMLQSVPELRQFLYVVKDQEQRLICD
EVIDAFEAKVLSQLPSMEHQIIHGDFNEQNIVVEQVPNQTEYTIKGVIDF
GDTSKSPLIFEIGIALTYMILQANDLANGGIFLSGYTSLNPIENSELALL
KYCVTARFVQSLVMGLYTHTLHPTNEYLLVTQEKGWKLLQKLWRESFDDI
DELWASTGHQYLTQSNKASFLDH

BO34907.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:59:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG31751-PC 417 CG31751-PC 1..417 1..417 2171 100 Plus
CG31751-PB 417 CG31751-PB 1..417 1..417 2171 100 Plus
CG31751-PA 417 CG31751-PA 1..417 1..417 2171 100 Plus