Clone BO34925 Report

Search the DGRC for BO34925

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:349
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG17658-RA
Protein status:BO34925.pep: Imported from assembly
Sequenced Size:1468

Clone Sequence Records

BO34925.complete Sequence

1468 bp assembled on 2014-07-17

GenBank Submission: KX797060

> BO34925.complete
GAAGTTATCAGTCGACATGATGGCGCCGGTAGATCCACCAGTGGGATCCT
TTCTGAAGTGCTTCGTCTGCGTCTCCGATGAGGGCAGGACTTGGACAGAA
TTGATACAAGGTTTCACCAAGGAATCGGACAAGGTGGAAAAGAACCTTGC
TCACCTGCAAACGCTTCTGGAGAAAGCACATGTGAAGCCCAGCGTGATAT
GCAGAGGCTGCAATATGCAGCGATACTGCAGCCTGTCCCATCTCGTGGCG
GATCGTCAAGAACACAAGCCACTCTGCGAGGTGCTGAGGGATCTGCAGAA
GTCCATGAAGATCGATCACCCGTTGAAGCTGCTCGGCCAAATCACCGATC
GCAGGAAGCTTCAGCTCGTCATTTCGCAGCTAAAGATGGTCCTGCTGGCC
AAGTTGGGCAGACCACTGAATCAGCGGGAGCATCAGCTAATCGGCAACCC
AGCCGTGTGCGATGTGTGCTTCAGCACTGAAGCTCTCGAGGACTGTGAAG
GATGTGCCGGAGTGGCCTTCTGCTCCGCGGCACACCAACGCCTAGTCAGG
GGCTATCACACCCCGGAGGATTGCCAGACCCTGGCTCTGATTGCCACTCC
GTTTCGTCAGTTGAACTGTCTAGTGAATATCAAGGACTTCTACCGCAGTT
GCCCACTAAAAGAGTCTAATCTAATCAAGGCTTTCACCGAAGCCACCGAC
ATACGGATCAGCGACACTCCTTGGACCGATCTGGAATCGTACCAGCTATT
CGCTACCTGTTCCTCCTTCAGCGGCATCGCAAGTCTGTGCCTGGCCCTGT
CGCACATTTCCTGGGTCCCAGATCCGAATAAAGCTGTCATAGTCTACGTG
GCCGGCGCCACCGAGGACACTTTGCGCTACTTCGAGGACATGCACCTGCG
TTTTCTGTTCCTGCAGTACCCAAGCATTCGTAATCTGGAATTACACTTCA
TTGGAAGAACCGTTGGGCGCATCGACCAAGTGGATATCAAATTCAGCGAC
AGGAGCTTTGAACAAACCGTGGTGAAATGCTTTTACCCCCTGTCATTTTC
ACAATATTCCTGTATTCTAAATGTGGATCCCACCTTGATTCTCATCATGC
AACCCGATTTCTTCGGAGTCGGTAAAGTAACCCAGAGAATTTCTAGGTAT
ATGAAAAGGAAGGTTCCACTCGAAAACGAATGGAAGCCTTGCTTGTCAAG
TGTTATTCGATCTTTTGGTGTTCCCATTTGCTACACTTCGATTTCAAGGG
CTCAGGCAATTTCCGATTTCGCGGCCATCACATTGTCCGCTGAGAAGAGC
AAGATTGCCATCGAGAGAGCCTACAATATAATGGGCAATCCCTATCGTGA
AATATTGCCACTGCACAATCCAGCACCAGAAGATACCGAGAGGATTGTGT
ATGCCAATAACTACCTCGAGGTTATTTTCACAAGCAAAAAAAAATGCCAA
GCAAGCTTTCTAGACCAT

BO34925.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:13:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG17658-RA 1437 CG17658-PA 1..1434 17..1450 7170 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG17658-RA 1875 CG17658-RA 141..1574 17..1450 7170 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:13:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23895263..23896696 17..1450 7170 100 Plus
Blast to na_te.dros performed 2014-11-28 15:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 3148..3250 929..1030 115 60.6 Plus

BO34925.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-17 10:54:22 Download gff for BO34925.complete
Subject Subject Range Query Range Percent Splice Strand
CG17658-RA 141..1574 17..1452 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:33:55 Download gff for BO34925.complete
Subject Subject Range Query Range Percent Splice Strand
CG17658-RA 141..1574 17..1452 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:33:55 Download gff for BO34925.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23895263..23896696 17..1452 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-17 10:54:22 Download gff for BO34925.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19782786..19784219 17..1452 99   Plus

BO34925.pep Sequence

Translation from 16 to 1468

> BO34925.pep
MMAPVDPPVGSFLKCFVCVSDEGRTWTELIQGFTKESDKVEKNLAHLQTL
LEKAHVKPSVICRGCNMQRYCSLSHLVADRQEHKPLCEVLRDLQKSMKID
HPLKLLGQITDRRKLQLVISQLKMVLLAKLGRPLNQREHQLIGNPAVCDV
CFSTEALEDCEGCAGVAFCSAAHQRLVRGYHTPEDCQTLALIATPFRQLN
CLVNIKDFYRSCPLKESNLIKAFTEATDIRISDTPWTDLESYQLFATCSS
FSGIASLCLALSHISWVPDPNKAVIVYVAGATEDTLRYFEDMHLRFLFLQ
YPSIRNLELHFIGRTVGRIDQVDIKFSDRSFEQTVVKCFYPLSFSQYSCI
LNVDPTLILIMQPDFFGVGKVTQRISRYMKRKVPLENEWKPCLSSVIRSF
GVPICYTSISRAQAISDFAAITLSAEKSKIAIERAYNIMGNPYREILPLH
NPAPEDTERIVYANNYLEVIFTSKKKCQASFLDH

BO34925.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG17658-PA 478 CG17658-PA 1..478 1..478 2513 100 Plus