BO34926.complete Sequence
1300 bp assembled on 2014-03-03
GenBank Submission: KX799046
> BO34926.complete
GAAGTTATCAGTCGACATGAAGCCGGAGGACCAGAACAACTTTTCTCAGA
ATTCGCGATCCTCTCCAGATTCCAGCACTGAGAACAATTCGAGCAGCAGT
GATTCGGAAATGGAATTTGTGGGCACAAGTGCACGGGGAATGCTGAAACA
TAAGAAAAAAGATGAGAGGAAAATATCGGAACTCACCCGAAAGTTGGCGG
AGGCTGAAATAAATCTGAAGGCCCAACAGGAGAAGGGCAGTATACTTGAA
AACTGCATCAAGGATAAGGATGATTTTATTAAGACCCTGCAATTGTCGAT
TGACTTAGTAACGCAAACAAAAGAAATGACCATACAGAAGTTACAAACTC
AAATTATGGACTTGCAAAGTGATCTCGACTTGAGTAGGATTACAATTAAG
AAGAACGATGGAGGAAATTGTGCTCCAGCGCATGATAAAGTTGTGAAAGA
ACGAAAGGAGTTAAATATGGAAAATGGAAAATTTCGAGAGGGGAATGATC
AGATTGTTGAAATCGAGAAAATTTTGAACTCAAAAGAGGCGGAAATCGCC
AGACTAGAATTCAAAATTGACGAGTCGAAGCTAAAAATTGTGCAATTGGA
AGGTGCAGTAAAGGCGAAGGACGAAAAGATAGTGAAAATGACAGAGATAT
TGTCTGAGTATAACGTTAATAATAAGGACCACGATGAATTCGTATTACTG
GGCTCTTCCAAGTTGCCTTCAATTAAATTGGTGACACTACCTGATTTCGA
ACCCTTTGCCTCAGTTTTCGAGGATATTCCTTCTGCCGGTCGTGGTTGGA
TGATAATCCAGCGTAGAATCGATGGCAGTTTCGATAACGCCACTGAATCA
AATATAATAACGGGCTGTGGGGATTTGGGTGGCGAGTTCTGGCTTGGCCT
ACAAAAATTGCATAAAATGACGACACATCGACGAATGGAACTATATATCC
AGCTCGTCGATTTCGACAATGCTAGTGCTTATGCAAGATATGATAATTTT
GTTATTGGCGATGAAAAACAGAAATACAAACTGCTTTCCCTTGGCGAATA
CTCAGGAAATGCTGGCGACGCATTTCGCAGTCATATAAACCATATTATTG
TTGGAAATCCGTTTGCAATGGAATCATCGAAATGGTGGGGTACAATGAAC
TGTAACTTGAACGGAAAATATCGGAATTCCAAAGTTGAGTTGGACACGAC
CGATGGCATTTGGTGGGGTAATTGGAATGTTGGTAATAGATATCCCCTGA
AGTCGTGCAAAATGCTAATCAGACCAATGCCGGCAAGCTTTCTAGACCAT
BO34926.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:59:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7668-RC | 1269 | CG7668-PC | 1..1266 | 17..1282 | 6330 | 100 | Plus |
CG7668-RA | 1269 | CG7668-PA | 1..1266 | 17..1282 | 6330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:59:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7668-RC | 1736 | CG7668-RC | 182..1448 | 16..1282 | 6335 | 100 | Plus |
CG7668-RA | 1506 | CG7668-RA | 182..1448 | 16..1282 | 6335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:59:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20003302..20004363 | 91..1152 | 5310 | 100 | Plus |
3L | 28110227 | 3L | 20004416..20004546 | 1152..1282 | 655 | 100 | Plus |
3L | 28110227 | 3L | 20002917..20002992 | 16..91 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:59:30 has no hits.
BO34926.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:06 Download gff for
BO34926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7668-RA | 183..1448 | 17..1284 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:41 Download gff for
BO34926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7668-RA | 183..1448 | 17..1284 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:41 Download gff for
BO34926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20004417..20004546 | 1153..1284 | 98 | | Plus |
3L | 20002918..20002992 | 17..91 | 100 | -> | Plus |
3L | 20003303..20004363 | 92..1152 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:06 Download gff for
BO34926.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19997517..19997646 | 1153..1284 | 98 | | Plus |
arm_3L | 19996018..19996092 | 17..91 | 100 | -> | Plus |
arm_3L | 19996403..19997463 | 92..1152 | 100 | -> | Plus |
BO34926.pep Sequence
Translation from 16 to 1300
> BO34926.pep
MKPEDQNNFSQNSRSSPDSSTENNSSSSDSEMEFVGTSARGMLKHKKKDE
RKISELTRKLAEAEINLKAQQEKGSILENCIKDKDDFIKTLQLSIDLVTQ
TKEMTIQKLQTQIMDLQSDLDLSRITIKKNDGGNCAPAHDKVVKERKELN
MENGKFREGNDQIVEIEKILNSKEAEIARLEFKIDESKLKIVQLEGAVKA
KDEKIVKMTEILSEYNVNNKDHDEFVLLGSSKLPSIKLVTLPDFEPFASV
FEDIPSAGRGWMIIQRRIDGSFDNATESNIITGCGDLGGEFWLGLQKLHK
MTTHRRMELYIQLVDFDNASAYARYDNFVIGDEKQKYKLLSLGEYSGNAG
DAFRSHINHIIVGNPFAMESSKWWGTMNCNLNGKYRNSKVELDTTDGIWW
GNWNVGNRYPLKSCKMLIRPMPASFLDH
BO34926.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:59:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7668-PC | 422 | CG7668-PC | 1..422 | 1..422 | 2194 | 100 | Plus |
CG7668-PA | 422 | CG7668-PA | 1..422 | 1..422 | 2194 | 100 | Plus |
CG8642-PB | 429 | CG8642-PB | 67..412 | 57..420 | 343 | 30.1 | Plus |
CG6788-PA | 358 | CG6788-PA | 99..355 | 178..420 | 312 | 33.5 | Plus |
CG30281-PA | 291 | CG30281-PA | 24..273 | 183..420 | 284 | 34 | Plus |