Clone BO34926 Report

Search the DGRC for BO34926

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:349
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG7668-RA
Protein status:BO34926.pep: Imported from assembly
Sequenced Size:1300

Clone Sequence Records

BO34926.complete Sequence

1300 bp assembled on 2014-03-03

GenBank Submission: KX799046

> BO34926.complete
GAAGTTATCAGTCGACATGAAGCCGGAGGACCAGAACAACTTTTCTCAGA
ATTCGCGATCCTCTCCAGATTCCAGCACTGAGAACAATTCGAGCAGCAGT
GATTCGGAAATGGAATTTGTGGGCACAAGTGCACGGGGAATGCTGAAACA
TAAGAAAAAAGATGAGAGGAAAATATCGGAACTCACCCGAAAGTTGGCGG
AGGCTGAAATAAATCTGAAGGCCCAACAGGAGAAGGGCAGTATACTTGAA
AACTGCATCAAGGATAAGGATGATTTTATTAAGACCCTGCAATTGTCGAT
TGACTTAGTAACGCAAACAAAAGAAATGACCATACAGAAGTTACAAACTC
AAATTATGGACTTGCAAAGTGATCTCGACTTGAGTAGGATTACAATTAAG
AAGAACGATGGAGGAAATTGTGCTCCAGCGCATGATAAAGTTGTGAAAGA
ACGAAAGGAGTTAAATATGGAAAATGGAAAATTTCGAGAGGGGAATGATC
AGATTGTTGAAATCGAGAAAATTTTGAACTCAAAAGAGGCGGAAATCGCC
AGACTAGAATTCAAAATTGACGAGTCGAAGCTAAAAATTGTGCAATTGGA
AGGTGCAGTAAAGGCGAAGGACGAAAAGATAGTGAAAATGACAGAGATAT
TGTCTGAGTATAACGTTAATAATAAGGACCACGATGAATTCGTATTACTG
GGCTCTTCCAAGTTGCCTTCAATTAAATTGGTGACACTACCTGATTTCGA
ACCCTTTGCCTCAGTTTTCGAGGATATTCCTTCTGCCGGTCGTGGTTGGA
TGATAATCCAGCGTAGAATCGATGGCAGTTTCGATAACGCCACTGAATCA
AATATAATAACGGGCTGTGGGGATTTGGGTGGCGAGTTCTGGCTTGGCCT
ACAAAAATTGCATAAAATGACGACACATCGACGAATGGAACTATATATCC
AGCTCGTCGATTTCGACAATGCTAGTGCTTATGCAAGATATGATAATTTT
GTTATTGGCGATGAAAAACAGAAATACAAACTGCTTTCCCTTGGCGAATA
CTCAGGAAATGCTGGCGACGCATTTCGCAGTCATATAAACCATATTATTG
TTGGAAATCCGTTTGCAATGGAATCATCGAAATGGTGGGGTACAATGAAC
TGTAACTTGAACGGAAAATATCGGAATTCCAAAGTTGAGTTGGACACGAC
CGATGGCATTTGGTGGGGTAATTGGAATGTTGGTAATAGATATCCCCTGA
AGTCGTGCAAAATGCTAATCAGACCAATGCCGGCAAGCTTTCTAGACCAT

BO34926.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:59:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG7668-RC 1269 CG7668-PC 1..1266 17..1282 6330 100 Plus
CG7668-RA 1269 CG7668-PA 1..1266 17..1282 6330 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:59:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG7668-RC 1736 CG7668-RC 182..1448 16..1282 6335 100 Plus
CG7668-RA 1506 CG7668-RA 182..1448 16..1282 6335 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:59:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20003302..20004363 91..1152 5310 100 Plus
3L 28110227 3L 20004416..20004546 1152..1282 655 100 Plus
3L 28110227 3L 20002917..20002992 16..91 380 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:59:30 has no hits.

BO34926.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:06 Download gff for BO34926.complete
Subject Subject Range Query Range Percent Splice Strand
CG7668-RA 183..1448 17..1284 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:41 Download gff for BO34926.complete
Subject Subject Range Query Range Percent Splice Strand
CG7668-RA 183..1448 17..1284 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:41 Download gff for BO34926.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20004417..20004546 1153..1284 98   Plus
3L 20002918..20002992 17..91 100 -> Plus
3L 20003303..20004363 92..1152 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:06 Download gff for BO34926.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19997517..19997646 1153..1284 98   Plus
arm_3L 19996018..19996092 17..91 100 -> Plus
arm_3L 19996403..19997463 92..1152 100 -> Plus

BO34926.pep Sequence

Translation from 16 to 1300

> BO34926.pep
MKPEDQNNFSQNSRSSPDSSTENNSSSSDSEMEFVGTSARGMLKHKKKDE
RKISELTRKLAEAEINLKAQQEKGSILENCIKDKDDFIKTLQLSIDLVTQ
TKEMTIQKLQTQIMDLQSDLDLSRITIKKNDGGNCAPAHDKVVKERKELN
MENGKFREGNDQIVEIEKILNSKEAEIARLEFKIDESKLKIVQLEGAVKA
KDEKIVKMTEILSEYNVNNKDHDEFVLLGSSKLPSIKLVTLPDFEPFASV
FEDIPSAGRGWMIIQRRIDGSFDNATESNIITGCGDLGGEFWLGLQKLHK
MTTHRRMELYIQLVDFDNASAYARYDNFVIGDEKQKYKLLSLGEYSGNAG
DAFRSHINHIIVGNPFAMESSKWWGTMNCNLNGKYRNSKVELDTTDGIWW
GNWNVGNRYPLKSCKMLIRPMPASFLDH

BO34926.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:59:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG7668-PC 422 CG7668-PC 1..422 1..422 2194 100 Plus
CG7668-PA 422 CG7668-PA 1..422 1..422 2194 100 Plus
CG8642-PB 429 CG8642-PB 67..412 57..420 343 30.1 Plus
CG6788-PA 358 CG6788-PA 99..355 178..420 312 33.5 Plus
CG30281-PA 291 CG30281-PA 24..273 183..420 284 34 Plus