BO34946.complete Sequence
1408 bp assembled on 2014-03-03
GenBank Submission: KX794356
> BO34946.complete
GAAGTTATCAGTCGACATGAATAAGGCATCCCGAATTTTCTGTCCAGCCT
TGATCACACCCAAAAATGCGGTGGTCAAGCAAACGGAGCAACTGTCGCGC
AGCCAAAAGCTGCTGACAGAACTTGGCTTGGTTAAATCGGGCAGCAATGG
CACCTACCAAATAATGCCCATGGCCCAGCGATCGGTAGACAAGTGCATTG
ACTTGGTCCAAAGCAACATGCAACAGGCTGGTGGGCAGAAGATCACCCTG
CCCATCCTGACGCCCACAGGACTTTGGAAGAAGACGGGGCGACTGGACGG
CGATATATCCGAGTTCTACATGGTGCGGGATCGCAGCGGCAAGCAGTTCC
TCATGAGTCCAACCCACGAGGAGGCAGTGACTGCCATGCTGGCCACCACC
TCACCTATTTCCTATCGGCAGCTGCCCTTGAGACTCTTCCAAATCGGTCC
CAAGTTCAGGGATGAGCTTAAGACTCGATTTGGTTTGATGCGAGCCAAGG
AATTCCTAATGAAGGACATGTATTCCTTTGATGTCAGCGAAGAAACAGCC
ATGGAAACTTACACACTAGTTAATGCTGCATACGATAGGTTGTTCAAACA
GCTGGAGGTTCCTTTCGTTAAGGTGAATGCCGCCACTGGCATAATGGGTG
GCAGTGTATCCCACGAATACCATTATGTATCGCCCGTGGGCGAGGACAAC
CTACTGCAGTGCAGTTCCTGCGGCTTTGCTGGCAACTCTGAGGTTGTAAA
GGCCCCAGCTAGCTGCCCGAGCTGTAACAGCTCGGATTTGAAAGAAGTTC
GAGGAGTTGAGGTGGCCCACACCTTCCTGTTGGGGGACAAGTACTCCAAA
CCCTTGGGCGCCACATTTCTCAACACCACTGGGAAGCCGCAATCGTTGGT
CATGGGATGTTATGGCATTGGCATCACTAGGGTTATTGCTGCCGCTCTGG
AAGTCCTCTCCTCCGACCACGAACTCCGTTGGCCAAAGCTCCTAGCACCC
TACGATGTGTGTTTAATAGGACCCAAGCAAGGAAGCAAGGAACAGCCGGA
AGCGGAAGTGATAGAGAATGAACTTCTTCTGAATGTAGGAGAGATTTGCG
GCCACCAGGAGTTGTTGCACGATGATCGCAAGGAGCTGACTATCGGCAAA
CGTTTGCTGGAAGCCAAGCGTCTCGGACATCCGCTTACCATTGTAGTGGG
AGCCAAGTCAGCCCGTCTGGATTCCCCCAAGCTGGAAGTGCACACCAGCA
AAGGAGAAACATATGAGCTCGATTTCAGTGAAACCCTGAAACTGGTGGCA
GAACATAGCCAGCACAAAAAGAGTCTAGAACGAGGATGTTTTCAGAGTGA
AACTGAAGAAAGTAAAAGTCGATCGGTTGGCCATCAGCTTGCAAGCTTTC
TAGACCAT
BO34946.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:59:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-pro-RA | 1377 | CG12186-PA | 1..1374 | 17..1390 | 6690 | 99.1 | Plus |
| Aats-pro-RB | 372 | CG12186-PB | 1..345 | 17..361 | 1665 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-pro-RA | 1509 | CG12186-RA | 101..1476 | 15..1390 | 6700 | 99.1 | Plus |
| Aats-pro-RB | 1517 | CG12186-RB | 101..1484 | 15..1390 | 6585 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:59:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2650194..2650961 | 1390..623 | 3720 | 99 | Minus |
| 3L | 28110227 | 3L | 2651019..2651280 | 623..362 | 1310 | 100 | Minus |
| 3L | 28110227 | 3L | 2651342..2651595 | 361..108 | 1240 | 99.2 | Minus |
| 3L | 28110227 | 3L | 2651656..2651750 | 109..15 | 445 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:59:41 has no hits.
BO34946.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:10 Download gff for
BO34946.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-pro-RA | 103..1476 | 17..1392 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:46 Download gff for
BO34946.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-pro-RA | 103..1476 | 17..1392 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:46 Download gff for
BO34946.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2651656..2651748 | 17..109 | 97 | | Minus |
| 3L | 2650190..2650960 | 624..1392 | 98 | <- | Minus |
| 3L | 2651019..2651280 | 362..623 | 100 | <- | Minus |
| 3L | 2651342..2651593 | 110..361 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:10 Download gff for
BO34946.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2651656..2651748 | 17..109 | 97 | | Minus |
| arm_3L | 2650190..2650960 | 624..1392 | 98 | <- | Minus |
| arm_3L | 2651019..2651280 | 362..623 | 100 | <- | Minus |
| arm_3L | 2651342..2651593 | 110..361 | 99 | <- | Minus |
BO34946.pep Sequence
Translation from 16 to 1408
> BO34946.pep
MNKASRIFCPALITPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIM
PMAQRSVDKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEF
YMVRDRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDE
LKTRFGLMRAKEFLMKDMYSFDVSEETAMETYTLVNAAYDRLFKQLEVPF
VKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSSCGFAGNSEVVKAPASC
PSCNSSDLKEVRGVEVAHTFLLGDKYSKPLGATFLNTTGKPQSLVMGCYG
IGITRVIAAALEVLSSDHELRWPKLLAPYDVCLIGPKQGSKEQPEAEVIE
NELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVGAKSAR
LDSPKLEVHTSKGETYELDFSETLKLVAEHSQHKKSLERGCFQSETEESK
SRSVGHQLASFLDH
BO34946.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:59:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-pro-PA | 458 | CG12186-PA | 1..458 | 1..458 | 2354 | 100 | Plus |
| Aats-pro-PB | 123 | CG12186-PB | 1..118 | 1..118 | 591 | 98.3 | Plus |
