BO34947.complete Sequence
1246 bp assembled on 2014-03-03
GenBank Submission: KX798070
> BO34947.complete
GAAGTTATCAGTCGACATGTCGCACGCCATCGACGAGCTGCAGGCGATCA
TCGCCGATCTGAAGACGGAGCTGGAGACGGAGCCGAAATCCAGTGGCGGC
GTCGCTAGCAACAGCCGCCTGGCACGCGATCGCATCGATCGCATGTCCGC
CGAGGTGGTGGACTCCAATCCGTACAGCCGCCTGATGGCCCTGCAGCGGA
TGAACATCGTCAAGGACTACGAGCGCATTCGCTACAAGGCGGTGGCCATT
GTGGGCGTGGGCGGCGTGGGAAGCGTCACCGCCGACATGCTTACACGCTG
CGGCATTGGCAAACTGATACTCTTCGACTACGACAAAGTGGAGCTGGCCA
ACATGAACAGACTGTTCTTTACGCCCGATCAGGCGGGCCTCTCCAAAGTT
GCGGCCGCCGCCGCTACCCTGAGCTTTATCAATCCGGACGTGGAGATTGA
GACGCACAACTACAATATTACAACGGTGGAGAACTTTGATCGCTTCCTGG
ACACAATATCGCAGGGCGGACGGATAGCTGGCCAGCCGGTGGATCTGGTG
CTCAGCTGTGTGGACAATTTTGAGGCACGAATGGCAATCAATGCAGCGTG
CAATGAACGCAATCTCAACTGGTTTGAGTCGGGAGTTTCGGAAAATGCCG
TCTCGGGGCACATTCAGTTTATCCGTCCTGGCGATACCGCCTGTTTCGCT
TGTGCACCACCCTTGGTGGTGGCCGAGAACATCGACGAGAAGACGCTGAA
GAGAGAGGGCGTGTGCGCCGCTTCATTGCCCACAACTATGGGCATTACGG
CTGGCTTCCTTGTCCAGAACGCATTAAAGTATCTGCTGAATTTCGGCGAG
GTCTCTGACTATCTGGGCTACAATGCCCTTAGCGACTTCTTTCCCAAGAT
GACGCTCAAACCGAATCCGCAGTGCGATGACAGAAACTGTTTAGTTCGGC
AAAAAGAGTTCCAAGCCAGGCCCAAACCTGTGCTGATCGAAGAGAAGGCA
GTCAGCGAAGAGCCGCTGCATGCCACCAACGAATGGGGCATCGAACTGGT
CGCCGAGGATGCGCCAGAAAGTAATACAACGCCCGCCGAAACCCCAGTGA
TGGGTGAAGGGCTGAGGCTCGCCTACGAGGCTCCTGAGAAGTCCAGCGAA
ACGTCAGAGGAAACTGTATCTGCAGCTACCGCGGACGAAACCAGTCTGGA
AGACCTGATGGCGCAAATGAAGTCCATGGCAAGCTTTCTAGACCAT
BO34947.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:59:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1749-RA | 1215 | CG1749-PA | 1..1212 | 17..1228 | 6045 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:59:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1749-RA | 1432 | CG1749-RA | 137..1348 | 17..1228 | 6045 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:59:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11484045..11484976 | 297..1228 | 4660 | 100 | Plus |
| X | 23542271 | X | 11483654..11483939 | 17..302 | 1400 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:59:44 has no hits.
BO34947.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:11 Download gff for
BO34947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1749-RA | 137..1348 | 17..1230 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:28:49 Download gff for
BO34947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1749-RA | 137..1348 | 17..1230 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:28:49 Download gff for
BO34947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11483654..11483934 | 17..297 | 99 | -> | Plus |
| X | 11484046..11484976 | 298..1230 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:11 Download gff for
BO34947.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11377687..11377967 | 17..297 | 99 | -> | Plus |
| arm_X | 11378079..11379009 | 298..1230 | 99 | | Plus |
BO34947.pep Sequence
Translation from 16 to 1246
> BO34947.pep
MSHAIDELQAIIADLKTELETEPKSSGGVASNSRLARDRIDRMSAEVVDS
NPYSRLMALQRMNIVKDYERIRYKAVAIVGVGGVGSVTADMLTRCGIGKL
ILFDYDKVELANMNRLFFTPDQAGLSKVAAAAATLSFINPDVEIETHNYN
ITTVENFDRFLDTISQGGRIAGQPVDLVLSCVDNFEARMAINAACNERNL
NWFESGVSENAVSGHIQFIRPGDTACFACAPPLVVAENIDEKTLKREGVC
AASLPTTMGITAGFLVQNALKYLLNFGEVSDYLGYNALSDFFPKMTLKPN
PQCDDRNCLVRQKEFQARPKPVLIEEKAVSEEPLHATNEWGIELVAEDAP
ESNTTPAETPVMGEGLRLAYEAPEKSSETSEETVSAATADETSLEDLMAQ
MKSMASFLDH
BO34947.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:59:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1749-PA | 404 | CG1749-PA | 1..404 | 1..404 | 2061 | 100 | Plus |
| Uba2-PA | 700 | CG7528-PA | 15..165 | 69..231 | 192 | 29.3 | Plus |
| CG13090-PC | 453 | CG13090-PC | 34..202 | 5..195 | 175 | 30.7 | Plus |
| CG13090-PB | 453 | CG13090-PB | 34..202 | 5..195 | 175 | 30.7 | Plus |
| CG13090-PA | 453 | CG13090-PA | 34..202 | 5..195 | 175 | 30.7 | Plus |
