BO34948.complete Sequence
1210 bp assembled on 2013-12-04
GenBank Submission: KX800013
> BO34948.complete
GAAGTTATCAGTCGACATGTCTGACGTGTTCATCGTGTCCGCCGCCCGCA
CGCCCATTGGTAGCTTCAATGGAACGCTTTCTAAACTGAAGGCCTCCGAC
CTGGGCAGCGTGGTCATCCAGGAGGTACTCCGGCGGGCGAATGTGGAGGG
CCAGGAGGTCAACGAAGTCATCTTGGGCCAGGCTCTAAGCGCCGGTCAGG
GTCAGAATCCAGCACGTCAGGCTTCACTCAAGGCGGGTCTGCCCATTCAG
GTGCCAGCCTACGGCATAAACATGCTATGTGGTTCCGGCTTAAAAACTGT
AGCGCTGGGTTACCAGGCCATCCGCTCGGGAGACGCACAGATTGTTGTGG
CAGGAGGTCAGGAGAGCATGTCCCTGGCTCCACACGTCATGCATCTGCGG
CAGGGCGTCAAAATGGGTCCGGGCACTATGGTGGACTCGATGATCCACGA
CGGCCTAACCGATGCCATGGAGAACATACACATGGGCATCACTGCCGAGA
ATCTGGCCGATAAGTATAACATCAGTCGTGAGGCCCAGGATGCCTATGCC
GTGCTGTCGCAAAATCGAGCCGAGGAGGCCCAAAAAAAGGGTTACTTCGA
CAAGGAGATTGTGCCCGTGGAGATCAAGGATCGCAAGGGTACGACCACAT
TCAGCAAGGATGAGTACATCAAGGCGGGCAGCACCGTCGAGGGTATACAG
AAGCTCAGGGCAGCCTTCAAAGAGGGCGGCTCTATAACCGCTGGCAATGC
CTCAGGCGTCAACGACTCCGCTGCTGCCGTACTACTGATGTCCGGCGAGG
AGGTGGCCAGGAAGGGTCTTAAGCCGCTGGCTAGGATTGTGGGCTGGACT
CAGAGTGGCATTGAGCCAAAGGTGATGGGACTGGGACCAGTCACAGCTGT
GGAAGCATTGCTTCAAAAGATTAACTGGAAGCGTGAGGAAGTGGATCTTT
ACGAGCTGAACGAAGCATTCGCCGCCCAATCACTGGCTGTCCTGCAGGAC
CTGCAGCTGGATGCTCAGAAAGTAAATGTCAATGGCGGTGCCATTGCCCT
GGGCCACCCGATTGGAGCTTCAGGTGCCCGTGTCTTGGTCACTTTGCTCT
ATGCGCTGGAGCGCACCGGTGGAAGAAAGGGAATCGCATCGCTCTGCATC
GGTGGCGGCATGGGAATCGCCCTGGCCGTGGAGCGCCTCAGCGCAAGCTT
TCTAGACCAT
BO34948.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:36:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9149-RA | 1179 | CG9149-PA | 1..1176 | 17..1192 | 5880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9149-RA | 1439 | CG9149-RA | 108..1283 | 17..1192 | 5880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1303548..1303978 | 295..725 | 2155 | 100 | Plus |
3L | 28110227 | 3L | 1304279..1304561 | 910..1192 | 1415 | 100 | Plus |
3L | 28110227 | 3L | 1304036..1304223 | 723..910 | 940 | 100 | Plus |
3L | 28110227 | 3L | 1303187..1303310 | 59..182 | 620 | 100 | Plus |
3L | 28110227 | 3L | 1303379..1303493 | 180..294 | 575 | 100 | Plus |
3L | 28110227 | 3L | 1303051..1303096 | 17..62 | 230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:36:55 has no hits.
BO34948.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 09:59:02 Download gff for
BO34948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9149-RA | 108..1283 | 17..1194 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:18:24 Download gff for
BO34948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9149-RA | 108..1283 | 17..1194 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:18:24 Download gff for
BO34948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1303051..1303093 | 17..59 | 100 | -> | Plus |
3L | 1303188..1303309 | 60..181 | 100 | -> | Plus |
3L | 1303381..1303493 | 182..294 | 100 | -> | Plus |
3L | 1303548..1303977 | 295..724 | 100 | -> | Plus |
3L | 1304038..1304223 | 725..910 | 100 | -> | Plus |
3L | 1304280..1304561 | 911..1194 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 09:59:02 Download gff for
BO34948.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1303051..1303093 | 17..59 | 100 | -> | Plus |
arm_3L | 1303188..1303309 | 60..181 | 100 | -> | Plus |
arm_3L | 1303381..1303493 | 182..294 | 100 | -> | Plus |
arm_3L | 1303548..1303977 | 295..724 | 100 | -> | Plus |
arm_3L | 1304038..1304223 | 725..910 | 100 | -> | Plus |
arm_3L | 1304280..1304561 | 911..1194 | 99 | | Plus |
BO34948.pep Sequence
Translation from 16 to 1210
> BO34948.pep
MSDVFIVSAARTPIGSFNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNE
VILGQALSAGQGQNPARQASLKAGLPIQVPAYGINMLCGSGLKTVALGYQ
AIRSGDAQIVVAGGQESMSLAPHVMHLRQGVKMGPGTMVDSMIHDGLTDA
MENIHMGITAENLADKYNISREAQDAYAVLSQNRAEEAQKKGYFDKEIVP
VEIKDRKGTTTFSKDEYIKAGSTVEGIQKLRAAFKEGGSITAGNASGVND
SAAAVLLMSGEEVARKGLKPLARIVGWTQSGIEPKVMGLGPVTAVEALLQ
KINWKREEVDLYELNEAFAAQSLAVLQDLQLDAQKVNVNGGAIALGHPIG
ASGARVLVTLLYALERTGGRKGIASLCIGGGMGIALAVERLSASFLDH
BO34948.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:47:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9149-PA | 392 | CG9149-PA | 1..392 | 1..392 | 1945 | 100 | Plus |
yip2-PA | 398 | CG4600-PA | 8..396 | 4..389 | 820 | 43.4 | Plus |
CG10932-PB | 410 | CG10932-PB | 22..410 | 1..391 | 754 | 42.1 | Plus |
CG10932-PA | 410 | CG10932-PA | 22..410 | 1..391 | 754 | 42.1 | Plus |
Thiolase-PA | 469 | CG4581-PA | 43..469 | 3..397 | 448 | 29.4 | Plus |