Clone BO34953 Report

Search the DGRC for BO34953

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:349
Well:53
Vector:pDNR-Dual
Associated Gene/TranscriptGrip75-RA
Protein status:BO34953.pep: Imported from assembly
Sequenced Size:1984

Clone Sequence Records

BO34953.complete Sequence

1984 bp assembled on 2014-07-17

GenBank Submission: KX799154

> BO34953.complete
GAAGTTATCAGTCGACATGATACACGATTTGTTATTGGCTTGCCGGAGCC
ACAATCCGGAGCAGCTGGGTATAAAGGCATTCAATGAAACCACAGTCATT
GACCAGTTCATACATCCTTGCGAGCGGGAGATATTTATGGACATTATAAA
AATCATTAAGGTTTACCAAGAAGTTGAGCAGTTTACCCATTCATCGGGAA
GAAAGTCCGACACACATGGCGAACTTCCAGATAGTTTGCATGGTTACTAC
TTGCTCAATTTGGCCAAGGGCATTGAAATGGCTCTGGAGGAGTACTACGC
TGAGATCGGACGTCTGGAGAAGTATTGTTTGGGTAACGAGCGCAATTCGC
TCTCATATGTCTACAATGCCCTGTACGCCAAGTTCCCCCTTCTGGTCTTC
ATGCGTAATCTCATCACAGAGATCCATGTGCTGAATCTGCGAGGATGCGT
CTTGCTCCACAATCTACATCAGCAGTGCGAGCACGGCGATATTCAACTGG
AAAAAGCAATCAAGATAATTATGAAGCCTGTTAAGAACGCATTTTTCTCC
AGCCTGGCTCACTGGCTGTTGTTTGGAGTGATTGACGATGTCCACTCGGA
ATTCTTTATTAAGTTTACCCCAACGGATGCAGTTGATGGTAGCTCATTCA
GCAAATCAGCCACTTGCTCACTTCTGAGCGCAGAGAAAAACCCCGAGGAT
TACATATGGCAATATGAGGTGAATATGTCTCAGCTGCCAGGATTTTTCTC
CATCGTTTTAGCCGAAAAAGTTCTGTTCGTGGGACAAACAGTGCTGGTCT
TCAAAATGGGGCGCAACGTAAAAGTTAAAAACAAAACCGACCCACTGGCG
GCAAAACTGGCTGAATTGGATTCAGATGATATCTATCAGCTGTGGAGCGG
CAGGGAGTCCGAGTTCTTCAAAATGGTCGTTGATTTGAGCAACGAGGACA
CCATCAATGTGTTTCGCCTCGAGAAGGTTATTATCGATATCAAGAATTAC
GTTAGCGCCCGGCTGTCGGAGATCGCTGTGAACGAAGTGGATCTGGAGCG
GCAAATGGGACTGATTAAGGACTTCTTTTTGCTAGGCAGAGGAGAGTTCT
ACTTGGAGTTCTGCTCCCAAATGGTCGGTACCATGGAAACTTATCGCGAA
GAACGTTTTAAAAACGTCACTAGATCATTTGAGCTGGCAGCTACTGTCAC
GGGAATCACAGATGACTTGGACAAGTTTTCACTGATCTGCCAGAGAAGCA
CGTCTGAACCAGACGATACCTCCGACTTTAATTTTCTGCAAGGCCTCAGT
CTAAAATATGAGTATGAGTGGCCATTGAATCTTTTGTTCTCCCCAACAAC
GATCGAGCGGTACAACAATATATTCCGATTTTTACTGATCATTCGAACAT
ATCAATACGAAATACAAAGGGTCTGGGCCAAGCAGACTTGGAGGGCGAAG
AGTGCAAAGGATGTGCCTCCAAATAACAAAATCATAACTCTTCGCAACTA
TCTAATGTTCTTTCTGAACAACATGCAGTATTACATTCAAGTTGATGTGC
TGGAAAGTCAATTTGGAATTTTGATGAATGTGATCAAGAGCAGGAGTGAT
TTCGAAGTTATACAAAGGGCTCACACTGTATTTCTGGCAAATGTTCTTTC
GCATTGCTTCCTGCTTAACGAATCAGAGACCCAATTGAATGTCACCGGGA
GCCAAAACCGAAATCCCATTTATGGAACCCTTCTTAAACTCTTTGGCATA
TGTGAGAAGTTTGCGCATATGACCCAAACGAAAGATCCGTCTGATGACTT
AGAGGATGAAGTCGACCAACTTAATGAAAGTTTTGGTGTTCAAATTGCGA
GCCTTATCCAACTATTAGTCGATGTAAAATCAGCTTCTTGTTTGGGTCCG
CTTTCGCAGCTGCTTTTGCGTTTGGATTTCAATTGTTGGTTCAGTGCCAG
TCATAATACGTCCGCAGCAAGCTTTCTAGACCAT

BO34953.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:13:24
Subject Length Description Subject Range Query Range Score Percent Strand
Grip75-RA 1953 CG6176-PA 1..1950 17..1966 9750 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
Grip75-RA 2141 CG6176-RA 64..2013 17..1966 9750 100 Plus
CG7456-RA 2666 CG7456-RA 2475..2612 1966..1829 690 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10484253..10484760 676..1183 2540 100 Plus
2L 23513712 2L 10484823..10485199 1182..1558 1885 100 Plus
2L 23513712 2L 10483684..10483972 228..516 1445 100 Plus
2L 23513712 2L 10485254..10485527 1557..1830 1370 100 Plus
2L 23513712 2L 10484034..10484193 517..676 800 100 Plus
2L 23513712 2L 10483484..10483628 86..230 725 100 Plus
2L 23513712 2L 10485592..10485729 1829..1966 690 100 Plus
2L 23513712 2L 10483358..10483427 17..86 350 100 Plus
Blast to na_te.dros performed on 2014-11-28 15:13:23 has no hits.

BO34953.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-17 10:54:28 Download gff for BO34953.complete
Subject Subject Range Query Range Percent Splice Strand
Grip75-RA 64..2013 17..1968 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:34:01 Download gff for BO34953.complete
Subject Subject Range Query Range Percent Splice Strand
Grip75-RA 64..2013 17..1968 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:34:01 Download gff for BO34953.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10485594..10485729 1831..1968 98   Plus
2L 10484034..10484193 517..676 100 -> Plus
2L 10485254..10485527 1557..1830 100 -> Plus
2L 10483358..10483426 17..85 100 -> Plus
2L 10483484..10483628 86..230 100 -> Plus
2L 10483687..10483972 231..516 100 -> Plus
2L 10484254..10484760 677..1183 100 -> Plus
2L 10484825..10485197 1184..1556 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-17 10:54:28 Download gff for BO34953.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10484034..10484193 517..676 100 -> Plus
arm_2L 10483358..10483426 17..85 100 -> Plus
arm_2L 10483484..10483628 86..230 100 -> Plus
arm_2L 10483687..10483972 231..516 100 -> Plus
arm_2L 10484254..10484760 677..1183 100 -> Plus
arm_2L 10484825..10485197 1184..1556 100 -> Plus
arm_2L 10485254..10485527 1557..1830 100 -> Plus
arm_2L 10485594..10485729 1831..1968 98   Plus

BO34953.pep Sequence

Translation from 16 to 1984

> BO34953.pep
MIHDLLLACRSHNPEQLGIKAFNETTVIDQFIHPCEREIFMDIIKIIKVY
QEVEQFTHSSGRKSDTHGELPDSLHGYYLLNLAKGIEMALEEYYAEIGRL
EKYCLGNERNSLSYVYNALYAKFPLLVFMRNLITEIHVLNLRGCVLLHNL
HQQCEHGDIQLEKAIKIIMKPVKNAFFSSLAHWLLFGVIDDVHSEFFIKF
TPTDAVDGSSFSKSATCSLLSAEKNPEDYIWQYEVNMSQLPGFFSIVLAE
KVLFVGQTVLVFKMGRNVKVKNKTDPLAAKLAELDSDDIYQLWSGRESEF
FKMVVDLSNEDTINVFRLEKVIIDIKNYVSARLSEIAVNEVDLERQMGLI
KDFFLLGRGEFYLEFCSQMVGTMETYREERFKNVTRSFELAATVTGITDD
LDKFSLICQRSTSEPDDTSDFNFLQGLSLKYEYEWPLNLLFSPTTIERYN
NIFRFLLIIRTYQYEIQRVWAKQTWRAKSAKDVPPNNKIITLRNYLMFFL
NNMQYYIQVDVLESQFGILMNVIKSRSDFEVIQRAHTVFLANVLSHCFLL
NESETQLNVTGSQNRNPIYGTLLKLFGICEKFAHMTQTKDPSDDLEDEVD
QLNESFGVQIASLIQLLVDVKSASCLGPLSQLLLRLDFNCWFSASHNTSA
ASFLDH

BO34953.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:10:05
Subject Length Description Subject Range Query Range Score Percent Strand
Grip75-PA 650 CG6176-PA 1..650 1..650 3368 100 Plus
Grip84-PF 819 CG3917-PF 274..806 76..643 250 19.9 Plus
Grip84-PC 819 CG3917-PC 274..806 76..643 250 19.9 Plus
Grip84-PE 893 CG3917-PE 348..880 76..643 250 19.9 Plus
Grip84-PB 852 CG3917-PB 274..777 76..603 219 20 Plus