BO34953.complete Sequence
1984 bp assembled on 2014-07-17
GenBank Submission: KX799154
> BO34953.complete
GAAGTTATCAGTCGACATGATACACGATTTGTTATTGGCTTGCCGGAGCC
ACAATCCGGAGCAGCTGGGTATAAAGGCATTCAATGAAACCACAGTCATT
GACCAGTTCATACATCCTTGCGAGCGGGAGATATTTATGGACATTATAAA
AATCATTAAGGTTTACCAAGAAGTTGAGCAGTTTACCCATTCATCGGGAA
GAAAGTCCGACACACATGGCGAACTTCCAGATAGTTTGCATGGTTACTAC
TTGCTCAATTTGGCCAAGGGCATTGAAATGGCTCTGGAGGAGTACTACGC
TGAGATCGGACGTCTGGAGAAGTATTGTTTGGGTAACGAGCGCAATTCGC
TCTCATATGTCTACAATGCCCTGTACGCCAAGTTCCCCCTTCTGGTCTTC
ATGCGTAATCTCATCACAGAGATCCATGTGCTGAATCTGCGAGGATGCGT
CTTGCTCCACAATCTACATCAGCAGTGCGAGCACGGCGATATTCAACTGG
AAAAAGCAATCAAGATAATTATGAAGCCTGTTAAGAACGCATTTTTCTCC
AGCCTGGCTCACTGGCTGTTGTTTGGAGTGATTGACGATGTCCACTCGGA
ATTCTTTATTAAGTTTACCCCAACGGATGCAGTTGATGGTAGCTCATTCA
GCAAATCAGCCACTTGCTCACTTCTGAGCGCAGAGAAAAACCCCGAGGAT
TACATATGGCAATATGAGGTGAATATGTCTCAGCTGCCAGGATTTTTCTC
CATCGTTTTAGCCGAAAAAGTTCTGTTCGTGGGACAAACAGTGCTGGTCT
TCAAAATGGGGCGCAACGTAAAAGTTAAAAACAAAACCGACCCACTGGCG
GCAAAACTGGCTGAATTGGATTCAGATGATATCTATCAGCTGTGGAGCGG
CAGGGAGTCCGAGTTCTTCAAAATGGTCGTTGATTTGAGCAACGAGGACA
CCATCAATGTGTTTCGCCTCGAGAAGGTTATTATCGATATCAAGAATTAC
GTTAGCGCCCGGCTGTCGGAGATCGCTGTGAACGAAGTGGATCTGGAGCG
GCAAATGGGACTGATTAAGGACTTCTTTTTGCTAGGCAGAGGAGAGTTCT
ACTTGGAGTTCTGCTCCCAAATGGTCGGTACCATGGAAACTTATCGCGAA
GAACGTTTTAAAAACGTCACTAGATCATTTGAGCTGGCAGCTACTGTCAC
GGGAATCACAGATGACTTGGACAAGTTTTCACTGATCTGCCAGAGAAGCA
CGTCTGAACCAGACGATACCTCCGACTTTAATTTTCTGCAAGGCCTCAGT
CTAAAATATGAGTATGAGTGGCCATTGAATCTTTTGTTCTCCCCAACAAC
GATCGAGCGGTACAACAATATATTCCGATTTTTACTGATCATTCGAACAT
ATCAATACGAAATACAAAGGGTCTGGGCCAAGCAGACTTGGAGGGCGAAG
AGTGCAAAGGATGTGCCTCCAAATAACAAAATCATAACTCTTCGCAACTA
TCTAATGTTCTTTCTGAACAACATGCAGTATTACATTCAAGTTGATGTGC
TGGAAAGTCAATTTGGAATTTTGATGAATGTGATCAAGAGCAGGAGTGAT
TTCGAAGTTATACAAAGGGCTCACACTGTATTTCTGGCAAATGTTCTTTC
GCATTGCTTCCTGCTTAACGAATCAGAGACCCAATTGAATGTCACCGGGA
GCCAAAACCGAAATCCCATTTATGGAACCCTTCTTAAACTCTTTGGCATA
TGTGAGAAGTTTGCGCATATGACCCAAACGAAAGATCCGTCTGATGACTT
AGAGGATGAAGTCGACCAACTTAATGAAAGTTTTGGTGTTCAAATTGCGA
GCCTTATCCAACTATTAGTCGATGTAAAATCAGCTTCTTGTTTGGGTCCG
CTTTCGCAGCTGCTTTTGCGTTTGGATTTCAATTGTTGGTTCAGTGCCAG
TCATAATACGTCCGCAGCAAGCTTTCTAGACCAT
BO34953.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:13:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Grip75-RA | 1953 | CG6176-PA | 1..1950 | 17..1966 | 9750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:13:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Grip75-RA | 2141 | CG6176-RA | 64..2013 | 17..1966 | 9750 | 100 | Plus |
CG7456-RA | 2666 | CG7456-RA | 2475..2612 | 1966..1829 | 690 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:13:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10484253..10484760 | 676..1183 | 2540 | 100 | Plus |
2L | 23513712 | 2L | 10484823..10485199 | 1182..1558 | 1885 | 100 | Plus |
2L | 23513712 | 2L | 10483684..10483972 | 228..516 | 1445 | 100 | Plus |
2L | 23513712 | 2L | 10485254..10485527 | 1557..1830 | 1370 | 100 | Plus |
2L | 23513712 | 2L | 10484034..10484193 | 517..676 | 800 | 100 | Plus |
2L | 23513712 | 2L | 10483484..10483628 | 86..230 | 725 | 100 | Plus |
2L | 23513712 | 2L | 10485592..10485729 | 1829..1966 | 690 | 100 | Plus |
2L | 23513712 | 2L | 10483358..10483427 | 17..86 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:13:23 has no hits.
BO34953.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-17 10:54:28 Download gff for
BO34953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Grip75-RA | 64..2013 | 17..1968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:34:01 Download gff for
BO34953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Grip75-RA | 64..2013 | 17..1968 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:34:01 Download gff for
BO34953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10485594..10485729 | 1831..1968 | 98 | | Plus |
2L | 10484034..10484193 | 517..676 | 100 | -> | Plus |
2L | 10485254..10485527 | 1557..1830 | 100 | -> | Plus |
2L | 10483358..10483426 | 17..85 | 100 | -> | Plus |
2L | 10483484..10483628 | 86..230 | 100 | -> | Plus |
2L | 10483687..10483972 | 231..516 | 100 | -> | Plus |
2L | 10484254..10484760 | 677..1183 | 100 | -> | Plus |
2L | 10484825..10485197 | 1184..1556 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-17 10:54:28 Download gff for
BO34953.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10484034..10484193 | 517..676 | 100 | -> | Plus |
arm_2L | 10483358..10483426 | 17..85 | 100 | -> | Plus |
arm_2L | 10483484..10483628 | 86..230 | 100 | -> | Plus |
arm_2L | 10483687..10483972 | 231..516 | 100 | -> | Plus |
arm_2L | 10484254..10484760 | 677..1183 | 100 | -> | Plus |
arm_2L | 10484825..10485197 | 1184..1556 | 100 | -> | Plus |
arm_2L | 10485254..10485527 | 1557..1830 | 100 | -> | Plus |
arm_2L | 10485594..10485729 | 1831..1968 | 98 | | Plus |
BO34953.pep Sequence
Translation from 16 to 1984
> BO34953.pep
MIHDLLLACRSHNPEQLGIKAFNETTVIDQFIHPCEREIFMDIIKIIKVY
QEVEQFTHSSGRKSDTHGELPDSLHGYYLLNLAKGIEMALEEYYAEIGRL
EKYCLGNERNSLSYVYNALYAKFPLLVFMRNLITEIHVLNLRGCVLLHNL
HQQCEHGDIQLEKAIKIIMKPVKNAFFSSLAHWLLFGVIDDVHSEFFIKF
TPTDAVDGSSFSKSATCSLLSAEKNPEDYIWQYEVNMSQLPGFFSIVLAE
KVLFVGQTVLVFKMGRNVKVKNKTDPLAAKLAELDSDDIYQLWSGRESEF
FKMVVDLSNEDTINVFRLEKVIIDIKNYVSARLSEIAVNEVDLERQMGLI
KDFFLLGRGEFYLEFCSQMVGTMETYREERFKNVTRSFELAATVTGITDD
LDKFSLICQRSTSEPDDTSDFNFLQGLSLKYEYEWPLNLLFSPTTIERYN
NIFRFLLIIRTYQYEIQRVWAKQTWRAKSAKDVPPNNKIITLRNYLMFFL
NNMQYYIQVDVLESQFGILMNVIKSRSDFEVIQRAHTVFLANVLSHCFLL
NESETQLNVTGSQNRNPIYGTLLKLFGICEKFAHMTQTKDPSDDLEDEVD
QLNESFGVQIASLIQLLVDVKSASCLGPLSQLLLRLDFNCWFSASHNTSA
ASFLDH
BO34953.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:10:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Grip75-PA | 650 | CG6176-PA | 1..650 | 1..650 | 3368 | 100 | Plus |
Grip84-PF | 819 | CG3917-PF | 274..806 | 76..643 | 250 | 19.9 | Plus |
Grip84-PC | 819 | CG3917-PC | 274..806 | 76..643 | 250 | 19.9 | Plus |
Grip84-PE | 893 | CG3917-PE | 348..880 | 76..643 | 250 | 19.9 | Plus |
Grip84-PB | 852 | CG3917-PB | 274..777 | 76..603 | 219 | 20 | Plus |