BO34955.complete Sequence
1165 bp assembled on 2013-12-04
GenBank Submission: KX794571
> BO34955.complete
GAAGTTATCAGTCGACATGGCCTGGAAGACTTTCACGCTTCTACCCCTGC
TATTGGCAGCAGGTCTAGCTAATCCCTTGAGCTCCACAACGGAGCCATCT
ACCCCACCAGCTGCCAATCCTGACGTGCCGCAGATCATAAAGGAGGAGCA
CTTCCCGGCCATGGCCCCGGCCCAGGCTCTGGAGTCCAGCGGATCCAGTG
GGCAACCCATAATGCTGCAACCTCCTCTCGAATCGCCCAGCGCAGATGAG
GACGCACTGCGTCGCCGCACAATCACGTATGATCAGCGCCAGGAGGGGCA
GTACAACATTCGTGCTGATCTGGAGAACTTCATGATCCTCCTGATTCCAC
CTGGACCGCAGGAGGGCATCAGCCTGCTGGAGCTACTGGGTCGCGGAAAC
ACCAAGGGCAGTGGATCGCTCAAGCGCAAACATCCCGCGAGGAGCAACTC
ACTGAAGTCCTTCTACCAGAAAAGTCAGCTGCAGAAGTTGCAGCAGCAAC
AGAATCAGCGCCAATCCTCGCCAGCGGCGCATCTGCCGGAGTTCATTGAG
GGTCGGTCGCCCTATCACGTGGACATCTCAGCCAGCGATCCGGAGCAGGC
TCAACGCCTGCAGCGCCAGCAGGTGGACGTGCTGCCTCCGCAACTGATAC
CCATGCCGCAGCTAATTAAGCCCTTCCACTTGGAGGCGGAACCGGAGTTG
ATTCAAGCTCTGCCCCCCGTCTCCGCCAGCAGCAGTGCCGGTTCTAATCT
CCTCGAGAGCTTCAATCATCCCGGATCGCAGTACTTCCGCAGCTCCCGCT
CCTTGAGAGGCGATAGCTATCTGGATACCAATCGCCTGACCGGCGGCGAT
TATGCCAGTCCGCGCTCCATTAGTGCCCCCATTTACCGCAGCGATCTTGG
CAGAGGAGCCAATGGCCTTTACCCCCCCATCGACGCACCCACCTACTTCT
CGGACCAATCGCGCTCCTGGCAACTGGACGAGGAACCCACTCGGGCACAA
GCGGTGGAACCGGAGATCGTTAGCTTCGATCTGTTGGCCGACGACGACCT
GGCCGAGTCCCGAACCCTCCTCCGGGACGGACTGGCGCGCTGCGCTCGCG
GAGAACGTCGTGATAGCTACGGCGAATGTCGCCAGATCGAGGGCTATGCA
AGCTTTCTAGACCAT
BO34955.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:37:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13082-RA | 1134 | CG13082-PA | 1..1131 | 17..1147 | 5655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13082-RA | 1316 | CG13082-RA | 72..1202 | 17..1147 | 5655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19538496..19539626 | 17..1147 | 5655 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:37:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2332..2381 | 465..514 | 115 | 70 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 978..1037 | 476..532 | 113 | 68.3 | Plus |
BO34955.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 09:59:09 Download gff for
BO34955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13082-RA | 72..1202 | 17..1149 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:18:31 Download gff for
BO34955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13082-RA | 72..1202 | 17..1149 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:18:31 Download gff for
BO34955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19538496..19539626 | 17..1149 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 09:59:09 Download gff for
BO34955.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19538496..19539626 | 17..1149 | 99 | | Plus |
BO34955.pep Sequence
Translation from 16 to 1165
> BO34955.pep
MAWKTFTLLPLLLAAGLANPLSSTTEPSTPPAANPDVPQIIKEEHFPAMA
PAQALESSGSSGQPIMLQPPLESPSADEDALRRRTITYDQRQEGQYNIRA
DLENFMILLIPPGPQEGISLLELLGRGNTKGSGSLKRKHPARSNSLKSFY
QKSQLQKLQQQQNQRQSSPAAHLPEFIEGRSPYHVDISASDPEQAQRLQR
QQVDVLPPQLIPMPQLIKPFHLEAEPELIQALPPVSASSSAGSNLLESFN
HPGSQYFRSSRSLRGDSYLDTNRLTGGDYASPRSISAPIYRSDLGRGANG
LYPPIDAPTYFSDQSRSWQLDEEPTRAQAVEPEIVSFDLLADDDLAESRT
LLRDGLARCARGERRDSYGECRQIEGYASFLDH
BO34955.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:47:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13082-PA | 377 | CG13082-PA | 1..377 | 1..377 | 1943 | 100 | Plus |