BO34964.complete Sequence
1972 bp assembled on 2014-03-03
GenBank Submission: KX797884
> BO34964.complete
GAAGTTATCAGTCGACATGGTCGTCGTCTCCGACAGCCGCGTCCGTTTGC
CGCGTTACGGCGGAGTCAGCGTCAAACGGAAAACGCTAAATGTGCGCGTC
ACGACAATGGACGCGGAACTGGAGTTCGCCATTCAGTCGACGACGACGGG
CAAGCAATTGTTTGACCAGGTGGTGAAGACGATCGGCCTGCGAGAGGTTT
GGTTCTTTGGACTCCAGTACACCGACTCCAAGGGCGACTCCACATGGATC
AAGCTGTACAAAAAGCCCGAATCGCCGGCCATAAAGACAATAAAATATTT
AAAGCGTGTAAAGAAGTATGTGGACAAAAAGACAGCCGACAGCAATGGAG
TAAATCATTTAGAGACGAGCGAAGAGGATGACGACGCCGATGATATGACT
GGATCAATGCCGTTTTCGACATGGGTGATGAACCAGGACGTGAAGAAGGA
GAATCCCTTGCAGTTTAGGTTCCGTGCCAAATTCTATCCCGAGGATGTGG
CCGAGGAGCTGATCCAGGACATTACACTGCGTCTGTTCTACCTGCAGGTG
AAGAATGCCATACTGACCGACGAGATCTATTGTCCGCCAGAGACATCCGT
GCTGCTCGCCTCGTACGCCGTCCAGGCGCGTCATGGTGACCACAATAAGA
CCACCCACACAGCCGGCTTTCTGGCCAACGATCGCCTGCTGCCGCAGCGC
GTCATCGACCAGCACAAGATGTCCAAGGACGAGTGGGAGCAGTCGATTAT
GACCTGGTGGCAGGAGCATCGCAGCATGCTGCGCGAGGATGCCATGATGG
AGTATCTGAAGATCGCCCAAGACCTGGAGATGTACGGCGTTAACTACTTT
GAGATCCGCAACAAGAAGGGCACGGATCTTTGGCTGGGCGTAGACGCACT
GGGTCTGAACATTTACGAGCAGGACGATAGGTTGACGCCGAAAATTGGTT
TCCCATGGTCCGAGATTCGCAACATTTCGTTCTCGGAGAAGAAGTTCATC
ATCAAGCCGATCGACAAGAAGGCTCCGGACTTTATGTTCTTTGCGCCACG
TGTCCGCATCAACAAGCGCATTCTGGCCCTCTGCATGGGCAACCACGAGC
TGTACATGCGTCGCCGCAAGCCGGACACCATCGATGTGCAGCAGATGAAG
GCGCAGGCGCGCGAGGAGAAGAATGCCAAACAGCAGGAACGTGAGAAGCT
GCAGCTGGCGCTGGCCGCACGCGAACGCGCTGAAAAGAAGCAGCAGGAGT
ACGAGGATCGGCTAAAGCAGATGCAGGAGGACATGGAGCGTTCGCAGCGC
GATCTGCTTGAGGCGCAGGACATGATCCGCCGGCTGGAGGAGCAGCTGAA
GCAGCTGCAGGCCGCCAAGGATGAGCTGGAGCTGCGCCAGAAGGAGCTGC
AGGCGATGCTGCAGCGCCTCGAGGAGGCCAAGAATATGGAGGCCGTCGAG
AAGCTCAAGCTCGAGGAGGAGATCATGGCCAAGCAGATGGAGGTGCAGCG
CATTCAGGACGAGGTCAACGCCAAGGATGAGGAGACAAAGCGTCTGCAGG
ACGAAGTGGAAGACGCCCGACGCAAGCAGGCTGAAGCCGCTGCCGCTCTG
CTGGCCGCGTCGACAACGCCGCAGCATCACCACGTGGCCGAGGATGAGAA
CGAGAACGAGGAGGAGCTGACGAACGGCGATGCCGGTGGCGATGTGTCGC
GCGACCTGGACACCGACGAGCATATCAAGGACCCCATCGAGGACAGACGC
ACGCTGGCCGAGCGCAACGAACGCTTGCACGATCAGCTCAAGGCTCTGAA
ACAAGATTTGGCGCAGTCTCGCGACGAGACGAAAGAGACGGCAAACGATA
AGATTCATCGCGAGAACGTTCGCCAGGGACGTGACAAGTACAAGACGCTC
CGCGAGATTCGTAAGGGCAACACAAAGCGTCGCGTCGATCAGTTTGAGAA
CATGGCAAGCTTTCTAGACCAT
BO34964.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:00:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Moe-RK | 1941 | CG10701-PK | 1..1938 | 17..1954 | 9690 | 100 | Plus |
| Moe-RB | 1950 | CG10701-PB | 1..1947 | 17..1954 | 9565 | 99.5 | Plus |
| Moe-RA | 1923 | CG10701-PA | 43..1920 | 86..1954 | 9220 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:00:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Moe-RK | 3064 | CG10701-RK | 189..2126 | 17..1954 | 9690 | 100 | Plus |
| Moe-RB | 2462 | CG10701-RB | 189..2135 | 17..1954 | 9565 | 99.5 | Plus |
| Moe-RA | 2353 | CG10701-RA | 149..2026 | 86..1954 | 9220 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:00:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8875094..8875861 | 1191..424 | 3840 | 100 | Minus |
| X | 23542271 | X | 8874511..8874900 | 1580..1191 | 1950 | 100 | Minus |
| X | 23542271 | X | 8874188..8874403 | 1793..1578 | 1080 | 100 | Minus |
| X | 23542271 | X | 8876573..8876753 | 265..85 | 905 | 100 | Minus |
| X | 23542271 | X | 8873950..8874113 | 1954..1791 | 820 | 100 | Minus |
| X | 23542271 | X | 8876306..8876439 | 397..264 | 670 | 100 | Minus |
| X | 23542271 | X | 8878469..8878537 | 85..17 | 345 | 100 | Minus |
| X | 23542271 | X | 19691833..19691934 | 1171..1070 | 195 | 79.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:00:15 has no hits.
BO34964.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:21 Download gff for
BO34964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Moe-RK | 189..2126 | 17..1956 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:29:01 Download gff for
BO34964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Moe-RK | 189..2126 | 17..1956 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:29:01 Download gff for
BO34964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8873948..8874111 | 1793..1956 | 98 | <- | Minus |
| X | 8874189..8874401 | 1580..1792 | 100 | <- | Minus |
| X | 8874512..8874899 | 1192..1579 | 100 | <- | Minus |
| X | 8875094..8875860 | 425..1191 | 100 | <- | Minus |
| X | 8876033..8876059 | 398..424 | 100 | <- | Minus |
| X | 8876306..8876437 | 266..397 | 100 | <- | Minus |
| X | 8876573..8876752 | 86..265 | 100 | <- | Minus |
| X | 8878469..8878537 | 17..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:21 Download gff for
BO34964.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8767981..8768144 | 1793..1956 | 98 | <- | Minus |
| arm_X | 8768222..8768434 | 1580..1792 | 100 | <- | Minus |
| arm_X | 8768545..8768932 | 1192..1579 | 100 | <- | Minus |
| arm_X | 8769127..8769893 | 425..1191 | 100 | <- | Minus |
| arm_X | 8770066..8770092 | 398..424 | 100 | <- | Minus |
| arm_X | 8770339..8770470 | 266..397 | 100 | <- | Minus |
| arm_X | 8770606..8770785 | 86..265 | 100 | <- | Minus |
| arm_X | 8772502..8772570 | 17..85 | 100 | | Minus |
BO34964.pep Sequence
Translation from 16 to 1972
> BO34964.pep
MVVVSDSRVRLPRYGGVSVKRKTLNVRVTTMDAELEFAIQSTTTGKQLFD
QVVKTIGLREVWFFGLQYTDSKGDSTWIKLYKKPESPAIKTIKYLKRVKK
YVDKKTADSNGVNHLETSEEDDDADDMTGSMPFSTWVMNQDVKKENPLQF
RFRAKFYPEDVAEELIQDITLRLFYLQVKNAILTDEIYCPPETSVLLASY
AVQARHGDHNKTTHTAGFLANDRLLPQRVIDQHKMSKDEWEQSIMTWWQE
HRSMLREDAMMEYLKIAQDLEMYGVNYFEIRNKKGTDLWLGVDALGLNIY
EQDDRLTPKIGFPWSEIRNISFSEKKFIIKPIDKKAPDFMFFAPRVRINK
RILALCMGNHELYMRRRKPDTIDVQQMKAQAREEKNAKQQEREKLQLALA
ARERAEKKQQEYEDRLKQMQEDMERSQRDLLEAQDMIRRLEEQLKQLQAA
KDELELRQKELQAMLQRLEEAKNMEAVEKLKLEEEIMAKQMEVQRIQDEV
NAKDEETKRLQDEVEDARRKQAEAAAALLAASTTPQHHHVAEDENENEEE
LTNGDAGGDVSRDLDTDEHIKDPIEDRRTLAERNERLHDQLKALKQDLAQ
SRDETKETANDKIHRENVRQGRDKYKTLREIRKGNTKRRVDQFENMASFL
DH
BO34964.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Moe-PK | 646 | CG10701-PK | 1..646 | 1..646 | 3316 | 100 | Plus |
| Moe-PB | 649 | CG10701-PB | 1..649 | 1..646 | 3302 | 99.5 | Plus |
| Moe-PA | 640 | CG10701-PA | 15..640 | 24..646 | 3190 | 99.5 | Plus |
| Moe-PM | 584 | CG10701-PM | 4..584 | 22..646 | 2926 | 92.8 | Plus |
| Moe-PD | 575 | CG10701-PD | 4..575 | 22..646 | 2828 | 90.7 | Plus |
