BO34977.complete Sequence
631 bp assembled on 2013-12-04
GenBank Submission: KX797451
> BO34977.complete
GAAGTTATCAGTCGACATGCTGCAACTTCAAAAGATGAATACTCTGCTGC
TGCTCTTGGCCATGATGCGCTGCATCTGTGCCACGCCCATAGCTCCTGCC
ACGCCCGATGGCGCCACGCCCATCGACGCCCGCGTCTCGGCCGCCGACTT
CGGAGCCCAGGATGCTTTCGATGCCGCCGACAGCTCCGCGGAATCCACCC
ACGCGCAGGCCAGCGACGCCGGGTTCAAGATCTCTCTCCTGCCCACTCCG
GCTAAAACGGCGGAATCGGTGAATCTAGAGCAGGAGGCCATTCCCTCGAA
GGTGCTGAGCGTGTACGACAACAGTCAAAAGAGGCTGGCCGATTTGGCGC
AGCCCGTTCCCATTTTGGACTCCATCAGTGAGCACGAGAAGTACGGCAAC
AACGGTGACATGTTCGACGGCATCTCGCGATCCATTGTCAACGGCTACGA
GGCCTTTTCCAACCTGCTCAACACCTTTATTCAGGTGAGGGAGTGCCGAA
ATTGCGACCATTGTGTTTGGTTTGTTTGTTTGCCCTGTTTCTTGGTCAAT
CCATTCGCACACACGTTGCATAATGGTCCCAGCGATGCACCGGCTCAGCA
GCCAAACAAAATTGCAAGCTTTCTAGACCAT
BO34977.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:36:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5928-RC | 600 | CG5928-PC | 1..597 | 17..613 | 2985 | 100 | Plus |
| CG5928-RA | 552 | CG5928-PA | 1..468 | 17..484 | 2340 | 100 | Plus |
| CG5928-RB | 237 | CG5928-PB | 1..213 | 17..229 | 1065 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:36:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5928-RC | 1182 | CG5928-RC | 134..730 | 17..613 | 2985 | 100 | Plus |
| CG5928-RA | 806 | CG5928-RA | 134..601 | 17..484 | 2340 | 100 | Plus |
| CG5928-RB | 863 | CG5928-RB | 402..658 | 228..484 | 1285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:36:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6068549..6068812 | 350..613 | 1320 | 100 | Plus |
| X | 23542271 | X | 6068091..6068303 | 17..229 | 1065 | 100 | Plus |
| X | 23542271 | X | 6068359..6068483 | 228..352 | 625 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:36:20 has no hits.
BO34977.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 09:58:46 Download gff for
BO34977.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5928-RC | 128..724 | 17..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:18:07 Download gff for
BO34977.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5928-RC | 134..730 | 17..615 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:18:07 Download gff for
BO34977.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6068552..6068812 | 353..615 | 99 | | Plus |
| X | 6068091..6068303 | 17..229 | 100 | -> | Plus |
| X | 6068361..6068483 | 230..352 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 09:58:46 Download gff for
BO34977.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5962124..5962336 | 17..229 | 100 | -> | Plus |
| arm_X | 5962394..5962516 | 230..352 | 100 | -> | Plus |
| arm_X | 5962585..5962845 | 353..615 | 99 | | Plus |
BO34977.pep Sequence
Translation from 16 to 631
> BO34977.pep
MLQLQKMNTLLLLLAMMRCICATPIAPATPDGATPIDARVSAADFGAQDA
FDAADSSAESTHAQASDAGFKISLLPTPAKTAESVNLEQEAIPSKVLSVY
DNSQKRLADLAQPVPILDSISEHEKYGNNGDMFDGISRSIVNGYEAFSNL
LNTFIQVRECRNCDHCVWFVCLPCFLVNPFAHTLHNGPSDAPAQQPNKIA
SFLDH
BO34977.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:47:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5928-PC | 199 | CG5928-PC | 1..199 | 1..199 | 1040 | 100 | Plus |
| CG5928-PA | 183 | CG5928-PA | 1..156 | 1..156 | 782 | 100 | Plus |
| CG5928-PB | 78 | CG5928-PB | 1..73 | 1..73 | 363 | 98.6 | Plus |
