BO34983.complete Sequence
3022 bp assembled on 2014-07-07
GenBank Submission: KX795926
> BO34983.complete
GAAGTTATCAGTCGACATGCTGAACTACCTAGCGTGTGGTTCGTTATCGT
CAACCTCAAAAAAGGCATCATCACCTGTAAGTTCTTCCGGCCAAGCTTCT
GAATTGGACAGCCAAATTAGCCAGCAAGGCGATCTGGTCCGAGACCTAAA
GTCTAAAAAAGCAGCCAAGGATCAAATTGATGTTGCTGTGAAGAAGCTGC
TCGCTCTGAAAGCGGACTACAAATCAGCTACTGGAAAGGATTGGAAGCCA
GGGCAAACATCTGCTTCTTCTGCGCCTGTACCTGCCGCCAGCTCATCCTC
TGCCAACGACGCCGTTTCAGTTAATGCCAGCATTGTCAAACAAGGCGATT
TGGTCAGAGATCTAAAGGGAAAGAAGGCTAGCAAACCAGAGATTGACGCT
GCTGTAAAAACTCTTCTTGAACTTAAGGCTCAGTACAAGACTCTCACCGG
TCAGGATTGGAAACCAGGCACTGTACCTACCACTGCCGCTCCATCTGCAT
CTGCTGCTCCCTCTGTCGGTGTCAACGATTCGGTAGCCCAAATTCTTAGC
CAAATCACTGCCCAGGGTGACAAAGTTCGGGAGCTGAAGTCAGCTAAAGC
CGATAAGGCCACCGTTGATGCTGCAGTAAAGACGCTGCTCAGCTTGAAGG
CTGACTACAAAGCAGCCACCGGCAGTGACTGGAAACCAGGTACCACAGCT
CCAGCTCCAGCAGCAGCTCCTGTAAAAGTCAAGCAGGAGAAGAATCCGGA
CCCAGCTTCTGTCCTTACTGTAAACACACTGCTCAATAAGATCGCCCAAC
AAGGTGATAAAATACGTCAATTGAAATCGGCGAAATCGGAGAAATCCCTT
GTTGAAGCCGAGGTTAAACTTTTGCTGGCTTTGAAAACGGACTACAAATC
TCTAACTGGTCAAGAGTGGAAACCAGGTACTGTGGCACCCGCTCCCACCA
CTGTAAATGTGATCGATCTTACTGGTGGAGATTCAGGCAGTGACGTAGGC
AGTGTATTGAGCAAGATTCAGGCCCAAGGTGATAAGATCAGGAAATTGAA
ATCAGAGAAGGCAGCCAAGAACGTAATCGATCCTGAGGTTAAGACTCTGC
TTGCTCTTAAAGGTGAATATAAAACGCTAAGCGGTAAGGATTGGACGCCA
GACGCTAAATCTGAACCAGCTGTAGTAAAAAAGGAAGCTAGTCCCGTTTC
GATGGCATCGCCAGCTAAGGATGAACTCACCCAGGAGATTAATGCTCAGG
GGGAGAAGGTACGCGCCGCGAAAGGTAACAAGGCAGCCAAGGAGGTCATC
GATGCTGAAGTGGCCAAGTTGTTGGCCCTCAAAGCCAAGTACAAGGAGGT
CACGGGCACCGATTTCCCCGTAGCAGGTCGCGGAGGCGGCGGCGGAGGAG
GTTCCGCCAAGAAAGCGCCAAAGGAGGCACAACCAAAGCCAGCAAAGCCG
GTGAAGAAGGAACCTGCTGCCGATGCTTCCGGAGCTGTGAAAAAGCAAAC
ACGCCTGGGTCTGGAGGCTACCAAGGAGGATAACTTGCCTGACTGGTACT
CGCAGGTTATCACCAAGGGTGAGATGATCGAATATTACGACGTGTCTGGA
TGCTACATTCTGCGTCAATGGTCCTTTGCCATCTGGAAAGCAATCAAGAC
TTGGTTTGATGCTGAGATTACACGCATGGGTGTCAAGGAGTGCTACTTCC
CCATCTTCGTTTCTAAAGCTGTGCTGGAGAAGGAGAAGACGCATATCGCG
GACTTCGCTCCGGAAGTGGCCTGGGTCACCAAGTCCGGTGACTCTGATTT
GGCCGAGCCAATCGCCGTGCGTCCTACCTCCGAGACAGTCATGTACCCCG
CCTACGCCAAATGGGTACAATCCTACAGGGATCTGCCGATTCGCCTCAAT
CAGTGGAATAACGTTGTCCGCTGGGAATTCAAGCAGCCAACTCCTTTCCT
ACGTACCCGCGAGTTCCTGTGGCAGGAGGGTCACACCGCCTTCGCCGACA
AGGAAGAAGCCGCCAAGGAAGTTCTTGACATTCTCGATCTTTATGCCCTG
GTGTACACCCATCTGCTGGCCATTCCCGTGGTCAAGGGCCGCAAGACTGA
GAAGGAGAAGTTCGCTGGTGGTGACTACACCACCACCGTGGAGGCATTCA
TCTCGGCTTCAGGACGTGCCATTCAAGGTGCTACCAGTCATCATTTGGGC
CAGAATTTCTCTAAGATGTTCGAAATCGTTTACGAGGACCCTGAAACGCA
GCAGAAGAAGTACGTTTACCAGAACTCCTGGGGCATTACAACTCGCACTA
TTGGCGTGATGATCATGGTGCATGCCGACAACCAGGGCCTGGTGTTGCCC
CCGCATGTTGCCTGCATTCAGGCCATTGTGGTGCCCTGCGGCATCACAGT
TAACACGAAGGATGACGAGCGGGCACAGCTGCTTGACGCTTGCAAGGCCC
TTGAGAAGCGCCTTGTCGGCGGTGGAGTTCGTTGCGAGGGTGATTACCGA
GACAACTACTCTCCCGGCTGGAAGTTTAATCACTGGGAACTAAAGGGTGT
GCCGCTGCGCTTGGAAGTGGGTCCCAAGGACCTGAAGGCCCAACAACTGG
TGGCCGTGCGTCGCGACACTGTCGAAAAGATCACCATACCGCTGGCCGAT
GTGGAGAAGAAGATACCCGCGCTGCTCGAAACCATTCACGAGAGCATGCT
TAATAAGGCGCAAGAGGATATGACCAGTCACACGAAAAAGGTGACCAACT
GGACGGACTTCTGTGGTTTCCTAGAGCAGAAAAACATCCTTTTGGCTCCC
TTCTGCGGCGAGATAAGTTGCGAGGACAAAATCAAGGCGGACAGCGCCCG
CGGCGAAGAGGCCGAGCCAGGAGCTCCTGCCATGGGTGCCAAGTCGCTGT
GTATACCCTTCGATCAACCAGCTCCCATCGCGGCTAGCGATAAGTGCATC
AACCCCAGCTGCACCAACAAGCCCAAGTTCTACACGCTCTTCGGACGAAG
CTATGCAAGCTTTCTAGACCAT
BO34983.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:09:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-glupro-RB | 2991 | CG5394-PB | 1..2988 | 17..3004 | 14925 | 100 | Plus |
| Aats-glupro-RA | 5145 | CG5394-PA | 2197..5142 | 59..3004 | 14715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-glupro-RB | 3151 | CG5394-RB | 7..2994 | 17..3004 | 14925 | 100 | Plus |
| Aats-glupro-RA | 5405 | CG5394-RA | 2303..5248 | 59..3004 | 14715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23953446..23955305 | 1918..59 | 9300 | 100 | Minus |
| 3R | 32079331 | 3R | 23952293..23953378 | 3004..1919 | 5415 | 99.9 | Minus |
| 3R | 32079331 | 3R | 23955452..23955493 | 58..17 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:09:42 has no hits.
BO34983.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-07 10:51:34 Download gff for
BO34983.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-glupro-RB | 7..2994 | 17..3006 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:32:45 Download gff for
BO34983.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-glupro-RB | 7..2994 | 17..3006 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:32:45 Download gff for
BO34983.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23952291..23953378 | 1919..3006 | 99 | <- | Minus |
| 3R | 23953446..23955305 | 59..1918 | 100 | <- | Minus |
| 3R | 23955452..23955493 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-07 10:51:34 Download gff for
BO34983.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19778013..19779100 | 1919..3006 | 99 | <- | Minus |
| arm_3R | 19779168..19781027 | 59..1918 | 100 | <- | Minus |
| arm_3R | 19781174..19781215 | 17..58 | 100 | | Minus |
BO34983.pep Sequence
Translation from 16 to 3022
> BO34983.pep
MLNYLACGSLSSTSKKASSPVSSSGQASELDSQISQQGDLVRDLKSKKAA
KDQIDVAVKKLLALKADYKSATGKDWKPGQTSASSAPVPAASSSSANDAV
SVNASIVKQGDLVRDLKGKKASKPEIDAAVKTLLELKAQYKTLTGQDWKP
GTVPTTAAPSASAAPSVGVNDSVAQILSQITAQGDKVRELKSAKADKATV
DAAVKTLLSLKADYKAATGSDWKPGTTAPAPAAAPVKVKQEKNPDPASVL
TVNTLLNKIAQQGDKIRQLKSAKSEKSLVEAEVKLLLALKTDYKSLTGQE
WKPGTVAPAPTTVNVIDLTGGDSGSDVGSVLSKIQAQGDKIRKLKSEKAA
KNVIDPEVKTLLALKGEYKTLSGKDWTPDAKSEPAVVKKEASPVSMASPA
KDELTQEINAQGEKVRAAKGNKAAKEVIDAEVAKLLALKAKYKEVTGTDF
PVAGRGGGGGGGSAKKAPKEAQPKPAKPVKKEPAADASGAVKKQTRLGLE
ATKEDNLPDWYSQVITKGEMIEYYDVSGCYILRQWSFAIWKAIKTWFDAE
ITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSDLAEPIA
VRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTREF
LWQEGHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFA
GGDYTTTVEAFISASGRAIQGATSHHLGQNFSKMFEIVYEDPETQQKKYV
YQNSWGITTRTIGVMIMVHADNQGLVLPPHVACIQAIVVPCGITVNTKDD
ERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPGWKFNHWELKGVPLRLE
VGPKDLKAQQLVAVRRDTVEKITIPLADVEKKIPALLETIHESMLNKAQE
DMTSHTKKVTNWTDFCGFLEQKNILLAPFCGEISCEDKIKADSARGEEAE
PGAPAMGAKSLCIPFDQPAPIAASDKCINPSCTNKPKFYTLFGRSYASFL
DH
BO34983.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:07:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-glupro-PB | 996 | CG5394-PB | 1..996 | 1..996 | 5116 | 100 | Plus |
| Aats-glupro-PA | 1714 | CG5394-PA | 729..1714 | 11..996 | 5048 | 99.6 | Plus |
| Aats-glupro-PA | 1714 | CG5394-PA | 726..965 | 233..476 | 412 | 39.8 | Plus |
| CG15100-PA | 1022 | CG15100-PA | 807..1008 | 79..298 | 224 | 34.5 | Plus |
| CG15100-PA | 1022 | CG15100-PA | 813..1022 | 240..466 | 213 | 35.4 | Plus |
| CG15100-PA | 1022 | CG15100-PA | 810..1009 | 8..220 | 194 | 33.8 | Plus |
