BO34985.complete Sequence
2446 bp assembled on 2014-03-03
GenBank Submission: KX798623
> BO34985.complete
GAAGTTATCAGTCGACATGTCGGACAAGCAGCAGGAAAAGGAGCCAATCC
CCGAGGAGGAGCAGCAGCAGGAGCAGGAGCGGGAGCATGAGGCTCCTGGC
AGCAGACATGCCTGTTGCGGATCTGGACCGGATCCGGAAGCGGAACCGGA
AGTGGAGATGGATGTCGAGGTGGAGGAGGCATCGGGATCAGCAATTGGCG
CTGCAGCTGCTGGCGAATCGGATGCACCCGCTCCGGCCAATCCAAATCCG
GGGCTGGAACGCGACAGGGACAGGGACTCGCACGGCGACAGATCCACTCA
TCGTGATGAGTTTGGAACGCAGCGTGTTTACAAGAAGACCTCGCCAAATT
GTGTGCTGACTTTATATTTACCCACTCGCGAGATAACACTCACCGGAAAT
AATCCGTCCGTTTTGAGGGGCATCGTCTACGTGGATCCGAAGGCCATCCA
GGGATATCGCGTATACGCCCAGCTGACGCTGACGTTCCGGTATGGCCGCG
AGGATGAGGAGGTGATGGGTCTGCGATTTTGCAACGAGGCCATCATGTCG
CTGCACCAGATTTGGCCACGACTCGAGGAGCCCACGCCAGAGTCGCTCAG
TCCACTGCAGGAGGCCCTGATGAAGCGCCTTGGCGATGGAGCCCATCCCT
TCACCCTCTCGCTATCCTCCTACGCCCCACCCAGTGTCCAGTTGGTGCCC
GCCAAGCGCTATTACGGAGCTCCCATTGGCACCAGCTACGATGTTCGCTG
CTTCATCGCGGACAAAACGGATGAGAAATTCCATCGTCGGGCTTCGGTGA
AGATGGGCGTACGGGTCATCTATCGCACGGATGTCTTTCATCAGCATTTG
GCGCCCGAGCAGTATGCCGCCTTCGCCGGGCGTCAAAACATCGCCCAATC
GCCGCCGGCCAGTGCCACGCCCCCGTCGTGCGGCGAGGGCGGCGAACAGC
ATACAACTCACACCCAACAGCAATCGCAATCGCAGCCCAGTAGCGGATCC
AAGCACAAGTCGAAGTCCGAGCGCGGTGACTCCTTCCCCAAGCTGCGTCT
CTCGCCAAAATCCTTTCGATTCAGCGGTCGTTTCGGACGCAGCAAGAGCG
AGATCGAAAAGTGTCCCAATGATCCTTTCCACAGCTACAGCAAGTCCTTC
CAGGAGCACTGCGACAGCATGTTGCCACCGCACACTGGAGCCGGGGTCAC
CGGCGGAATCGGTGGCGTCAGTGTGGGTCCTTGTGGCGGTCCTCAAGGAT
CCGTCGACAAGCCCTTCCTGCTGCACGACGGCCGGGTGGGATTGAGGGCC
AGCTTGGACAAGGGCTGGTACACACACGGCGAGGACGTTCAGGTGACCGT
CAATATACGCAACGATAGCCGCAAGACGGTCCGTAAAGTACGGGTCTGCG
CCATCCAGCACGTCGACGTTTGCATGTTCAACAACGGCAAATTCAAGAAT
GTGGTGGCCGATTCGGATAATGTAACACCGCCGGTGGATCGCACAGTGGC
CGCTGGAGCCTCGTTGAACACCACGGTGACGCTCCGTCCGCAACGCGGTC
CCACCAAGAACTGGATCGCCCTGGAGGACACTTTGCAGCGGAGCACCGAG
CCGGAGGAGATCACCGGCGCCATTGCTGCTTCGGCCATCCGCTCGCCTCA
CTTTGTGATGCAGAACGCCCAGCTGTTGGGCGGTTGCGGCCATCCGTTGG
GCAGTCCGGCCCTGGTTACTCCACATCCACACCTCTGGCAGCCGGGCTCG
CAAGGTCAGGGTCAGCCTGGTAATCCCAACTCCGGCGGCGGCAATGAGGA
GCGCAACGTGTTCGCCATCTATGTGTCCTACTATGTCAAGGTGAAGCTCA
CCCTGAGCGGCATGGGTGGCGAGCTGTCCCTGAAGTTGCCCTTCGTCCTG
GTCCATGTGGATGAGACACAGCGTCCGGGGTTTGCCTCCGCTACGCTGGG
CGAGCTGCGTATGGAGATGGAGCGTCTGGCCCTACATGATGCACCCGTGG
GCAAGCGTAATGGTCGACGCCAGGCACAGCCCACTTCCGCGGAGATCGGA
GATGGACCCTCCACCAGTGCGGCCGCCGCCGCTGCAGCCGCTGCTGCAAA
GTCAGCCTCCCAATCCTCTGGCCAGTCAGGCGGGCATCTGGACATGATCG
AGAGCCTGGACGATGAATTCAACATCACGGTTCCGGTGCCAAGGAACGGC
TCCCATAAGCGGCGCTTGCAGCGCAGCGAGACCTTGGCCCGCGATCTGGA
GGAGCACGAGGAGCATGGTCCGATGCCCGAGGAAGAGGACCATATCGTTC
AGATCCATTTGGAGCAGGTGTCACCAGACAGGGACGAAATGCAGCAGGAG
GAGCAGCGTGTGCAGGAGGAGCAGGTGAGCCACGCACCCGGAGCCGAGAC
CGGTGCAGTCCCCAAGTCATCGAATGTGGCAAGCTTTCTAGACCAT
BO34985.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32683-RB | 2415 | CG32683-PB | 1..2412 | 17..2428 | 12060 | 100 | Plus |
| CG32683-RA | 2415 | CG32683-PA | 1..2412 | 17..2428 | 12060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:00:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32683-RB | 4879 | CG32683-RB | 62..2473 | 17..2428 | 12060 | 100 | Plus |
| CG32683-RA | 5139 | CG32683-RA | 322..2733 | 17..2428 | 12060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:00:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10412797..10413832 | 2428..1393 | 5180 | 100 | Minus |
| X | 23542271 | X | 10421133..10421531 | 1156..758 | 1995 | 100 | Minus |
| X | 23542271 | X | 10452157..10452431 | 291..17 | 1375 | 100 | Minus |
| X | 23542271 | X | 10420829..10421069 | 1395..1155 | 1205 | 100 | Minus |
| X | 23542271 | X | 10427318..10427521 | 491..288 | 1020 | 100 | Minus |
| X | 23542271 | X | 10424807..10424957 | 758..608 | 755 | 100 | Minus |
| X | 23542271 | X | 10427097..10427219 | 611..489 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:00:33 has no hits.
BO34985.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:29 Download gff for
BO34985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32683-RA | 322..2733 | 17..2430 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:29:10 Download gff for
BO34985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32683-RA | 322..2733 | 17..2430 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:29:10 Download gff for
BO34985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10412794..10413831 | 1394..2430 | 99 | <- | Minus |
| X | 10420831..10421067 | 1157..1393 | 100 | <- | Minus |
| X | 10421133..10421530 | 759..1156 | 100 | <- | Minus |
| X | 10424807..10424954 | 611..758 | 100 | <- | Minus |
| X | 10427098..10427218 | 490..610 | 100 | <- | Minus |
| X | 10427320..10427517 | 292..489 | 100 | <- | Minus |
| X | 10452157..10452431 | 17..291 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:29 Download gff for
BO34985.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10321131..10321251 | 490..610 | 100 | <- | Minus |
| arm_X | 10321353..10321550 | 292..489 | 100 | <- | Minus |
| arm_X | 10346190..10346464 | 17..291 | 100 | | Minus |
| arm_X | 10306827..10307864 | 1394..2430 | 99 | <- | Minus |
| arm_X | 10314864..10315100 | 1157..1393 | 100 | <- | Minus |
| arm_X | 10315166..10315563 | 759..1156 | 100 | <- | Minus |
| arm_X | 10318840..10318987 | 611..758 | 100 | <- | Minus |
BO34985.pep Sequence
Translation from 16 to 2446
> BO34985.pep
MSDKQQEKEPIPEEEQQQEQEREHEAPGSRHACCGSGPDPEAEPEVEMDV
EVEEASGSAIGAAAAGESDAPAPANPNPGLERDRDRDSHGDRSTHRDEFG
TQRVYKKTSPNCVLTLYLPTREITLTGNNPSVLRGIVYVDPKAIQGYRVY
AQLTLTFRYGREDEEVMGLRFCNEAIMSLHQIWPRLEEPTPESLSPLQEA
LMKRLGDGAHPFTLSLSSYAPPSVQLVPAKRYYGAPIGTSYDVRCFIADK
TDEKFHRRASVKMGVRVIYRTDVFHQHLAPEQYAAFAGRQNIAQSPPASA
TPPSCGEGGEQHTTHTQQQSQSQPSSGSKHKSKSERGDSFPKLRLSPKSF
RFSGRFGRSKSEIEKCPNDPFHSYSKSFQEHCDSMLPPHTGAGVTGGIGG
VSVGPCGGPQGSVDKPFLLHDGRVGLRASLDKGWYTHGEDVQVTVNIRND
SRKTVRKVRVCAIQHVDVCMFNNGKFKNVVADSDNVTPPVDRTVAAGASL
NTTVTLRPQRGPTKNWIALEDTLQRSTEPEEITGAIAASAIRSPHFVMQN
AQLLGGCGHPLGSPALVTPHPHLWQPGSQGQGQPGNPNSGGGNEERNVFA
IYVSYYVKVKLTLSGMGGELSLKLPFVLVHVDETQRPGFASATLGELRME
MERLALHDAPVGKRNGRRQAQPTSAEIGDGPSTSAAAAAAAAAAKSASQS
SGQSGGHLDMIESLDDEFNITVPVPRNGSHKRRLQRSETLARDLEEHEEH
GPMPEEEDHIVQIHLEQVSPDRDEMQQEEQRVQEEQVSHAPGAETGAVPK
SSNVASFLDH
BO34985.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:59:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32683-PB | 804 | CG32683-PB | 1..804 | 1..804 | 4238 | 100 | Plus |
| CG32683-PA | 804 | CG32683-PA | 1..804 | 1..804 | 4238 | 100 | Plus |
| krz-PB | 470 | CG1487-PB | 14..211 | 55..268 | 312 | 31.8 | Plus |
| krz-PA | 470 | CG1487-PA | 14..211 | 55..268 | 312 | 31.8 | Plus |
| Arr2-PA | 401 | CG5962-PA | 6..272 | 103..378 | 291 | 28.6 | Plus |
| krz-PB | 470 | CG1487-PB | 222..390 | 409..630 | 194 | 27.4 | Plus |
| krz-PA | 470 | CG1487-PA | 222..390 | 409..630 | 194 | 27.4 | Plus |
