BO34990.complete Sequence
1855 bp assembled on 2014-07-07
GenBank Submission: KX794420
> BO34990.complete
GAAGTTATCAGTCGACATGGTTCGCCAGATCTCGCCATGGAAAGTTCTCA
CCCGGCGCAAGAATCTCCAAGCGGATGGCAGCGAGGGGGAAACGAAGCTG
AATCGAGTTCTGGGTCTATGGGACCTCACGGCCCTGGGTGTCGGATCGAC
CTTGGGAGCTGGGGTCTACGTGCTGGCCGGACAGATAGCCAAGGATCAGG
CGGGTCCATCGGTGATGATATCGTTTGCCATCGCGGCACTGGCATCTTTG
CTGGCAGGAGTTTGCTATGCGGAATTTGGCGCTCGAGTTCCCAAGGCTGG
GTCGGCGTATGTATATAGTTATGTCTGTATCGGGGAATTCGTAGCTTTTG
TCATTGGATGGAATCTCATATTGGAATACGTTATTGGAACGGCTAGTGTT
TGTAGGGGTATCAGCCTGTACCTGGACTCCCTACTAAATGATACCCTGAA
ATACACATTCGCCGAGGTTGCTCCTATGAATGTCAGTTTCTTGGGCAGCT
ACTTTGACTTTTTGGCCTTTGGCCTAGTGGTTGTGTTTGGCGTTGCACTG
GCCTTTGGCGTGGAGACATCGACTATGGCAAATAATTTTGTGACGTGCCT
AAATATATTTATTTTGGGATTTGTCATAATCGCTGGCGCTTTAAAAGCTG
ACTATTCCAACTGGACGGTGGATCCGAGTACTGTGAGTGCGAATTCTACT
ATCGGATCTGGTGGGTTTTTCCCCTTTGGATTTGAAGGCACTCTTCGTGG
AGCAGCCACCTGCTTCTTTGGCTTTGTGGGATTCGATTGCATCGCCACCA
CAGGGGAAGAGGTCCGAAATCCTCGGAAAAATATCCCGAAATCGATTCTG
CTCTCACTGCTGATTATCTTTTTGTGCTATTTCGGAGTGTCCACTGTACT
GACATTGATGCTGCCATACTATATCCAGGATGTTAACGCACCACTGCCAT
ATGCCTTCGAGTATGTGGGTTGGCCAGTGGCCATGTGGATTGTCACCGTA
GGTGGTTTGGTGGGTCTGCTGGCCAGTCTCTTTGGAGCACTGTTCCCACT
GCCCAGGGTTATGTACTCGATGGCCCAGGATGGTCTTTTGTTTAAATTTC
TGGGCAAAGTGAGTCCGAGATTCCGAGTTCCAGTCACCGGATCTATTGTG
GCAGCTCTTTTCACGGCCGCAATTGCCGGACTCTTCGATTTGTCCCAACT
GGTCAGCCTGCTCTCAATCGGCACTTTATTGGCCTACAGCGTTGTGGCCA
TATCCATAATGCTTTTGCGATATATGGACTATTGTGAGGTTGACGAGAAT
CCAGGGCAGAGGGAAGTCAGAGCATCGGAAACCACTTCTTTAACTTCGAG
TTCCGAGCGATTCACGTTCGGTTCAGTATGCACACAACTGTTTAATGTTC
ATCGAGTCCAGGAGCCCAATGCAATATCGTCAAGAATTGTGGGAGTGCTT
TCAACATTGTTTTGCCTAATTTCCTTAGGCATAGGAGTGCTAATTATGCA
GGCTCATCTTTTAATCGCCTCCAAAGAAGTATGGGCCTTGACCCTCCTGA
TTGTGTTAGTCGTGCTGATGTTGCTGGTGATCTGTCTGATTTGCCTTCAG
CCCAGAGAAGCTCGTCGTAGATTATTTAGAGTTCCCTTTGTACCGATTGT
TCCTGCTATCAGTATCTTCATCAATATATATCTAATGCTTCAACTGGATA
CCTGGACGTGGATACGATTTGGAGTCTGGATGATTGTGGGACTTTCCATA
TACTTTTTCTACGGACTGCCCAACAGCTACAGAGAAATGAAGCGACAAAG
GGCCGGATGGCAGAAGCTCAAATACAGCGATCGTCTCGCAAGCTTTCTAG
ACCAT
BO34990.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:10:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7255-RI | 1824 | CG7255-PI | 1..1821 | 17..1837 | 9075 | 99.9 | Plus |
CG7255-RE | 1824 | CG7255-PE | 1..1821 | 17..1837 | 9075 | 99.9 | Plus |
CG7255-RG | 1824 | CG7255-PG | 1..1821 | 17..1837 | 9075 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:10:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7255-RI | 2225 | CG7255-RI | 265..2085 | 17..1837 | 9075 | 99.9 | Plus |
CG7255-RE | 2946 | CG7255-RE | 986..2806 | 17..1837 | 9075 | 99.9 | Plus |
CG7255-RG | 2920 | CG7255-RG | 960..2780 | 17..1837 | 9075 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:10:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15307673..15308491 | 646..1464 | 4095 | 100 | Plus |
3L | 28110227 | 3L | 15306954..15307241 | 255..542 | 1425 | 99.7 | Plus |
3L | 28110227 | 3L | 15308560..15308836 | 1464..1740 | 1370 | 99.6 | Plus |
3L | 28110227 | 3L | 15306558..15306799 | 17..258 | 1210 | 100 | Plus |
3L | 28110227 | 3L | 15307308..15307413 | 542..647 | 530 | 100 | Plus |
3L | 28110227 | 3L | 15310957..15311055 | 1739..1837 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:10:04 has no hits.
BO34990.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-07 10:51:39 Download gff for
BO34990.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7255-RG | 960..2780 | 17..1839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:32:51 Download gff for
BO34990.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7255-RG | 960..2780 | 17..1839 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:32:51 Download gff for
BO34990.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15308560..15308835 | 1464..1739 | 99 | -> | Plus |
3L | 15310958..15311055 | 1740..1839 | 98 | | Plus |
3L | 15306558..15306798 | 17..257 | 100 | -> | Plus |
3L | 15306957..15307241 | 258..542 | 99 | -> | Plus |
3L | 15307309..15307413 | 543..647 | 100 | -> | Plus |
3L | 15307675..15308490 | 648..1463 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-07 10:51:39 Download gff for
BO34990.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15300057..15300341 | 258..542 | 99 | -> | Plus |
arm_3L | 15300409..15300513 | 543..647 | 100 | -> | Plus |
arm_3L | 15299658..15299898 | 17..257 | 100 | -> | Plus |
arm_3L | 15300775..15301590 | 648..1463 | 100 | -> | Plus |
arm_3L | 15301660..15301935 | 1464..1739 | 99 | -> | Plus |
arm_3L | 15304058..15304155 | 1740..1839 | 98 | | Plus |
BO34990.pep Sequence
Translation from 16 to 1855
> BO34990.pep
MVRQISPWKVLTRRKNLQADGSEGETKLNRVLGLWDLTALGVGSTLGAGV
YVLAGQIAKDQAGPSVMISFAIAALASLLAGVCYAEFGARVPKAGSAYVY
SYVCIGEFVAFVIGWNLILEYVIGTASVCRGISLYLDSLLNDTLKYTFAE
VAPMNVSFLGSYFDFLAFGLVVVFGVALAFGVETSTMANNFVTCLNIFIL
GFVIIAGALKADYSNWTVDPSTVSANSTIGSGGFFPFGFEGTLRGAATCF
FGFVGFDCIATTGEEVRNPRKNIPKSILLSLLIIFLCYFGVSTVLTLMLP
YYIQDVNAPLPYAFEYVGWPVAMWIVTVGGLVGLLASLFGALFPLPRVMY
SMAQDGLLFKFLGKVSPRFRVPVTGSIVAALFTAAIAGLFDLSQLVSLLS
IGTLLAYSVVAISIMLLRYMDYCEVDENPGQREVRASETTSLTSSSERFT
FGSVCTQLFNVHRVQEPNAISSRIVGVLSTLFCLISLGIGVLIMQAHLLI
ASKEVWALTLLIVLVVLMLLVICLICLQPREARRRLFRVPFVPIVPAISI
FINIYLMLQLDTWTWIRFGVWMIVGLSIYFFYGLPNSYREMKRQRAGWQK
LKYSDRLASFLDH
BO34990.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:07:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7255-PI | 607 | CG7255-PI | 1..607 | 1..607 | 3093 | 100 | Plus |
CG7255-PE | 607 | CG7255-PE | 1..607 | 1..607 | 3093 | 100 | Plus |
CG7255-PG | 607 | CG7255-PG | 1..607 | 1..607 | 3093 | 100 | Plus |
CG7255-PH | 1063 | CG7255-PH | 1..579 | 1..579 | 2927 | 99.3 | Plus |
CG7255-PF | 1063 | CG7255-PF | 1..579 | 1..579 | 2927 | 99.3 | Plus |