Clone BO34990 Report

Search the DGRC for BO34990

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:349
Well:90
Vector:pDNR-Dual
Associated Gene/TranscriptCG7255-RE
Protein status:BO34990.pep: Imported from assembly
Sequenced Size:1855

Clone Sequence Records

BO34990.complete Sequence

1855 bp assembled on 2014-07-07

GenBank Submission: KX794420

> BO34990.complete
GAAGTTATCAGTCGACATGGTTCGCCAGATCTCGCCATGGAAAGTTCTCA
CCCGGCGCAAGAATCTCCAAGCGGATGGCAGCGAGGGGGAAACGAAGCTG
AATCGAGTTCTGGGTCTATGGGACCTCACGGCCCTGGGTGTCGGATCGAC
CTTGGGAGCTGGGGTCTACGTGCTGGCCGGACAGATAGCCAAGGATCAGG
CGGGTCCATCGGTGATGATATCGTTTGCCATCGCGGCACTGGCATCTTTG
CTGGCAGGAGTTTGCTATGCGGAATTTGGCGCTCGAGTTCCCAAGGCTGG
GTCGGCGTATGTATATAGTTATGTCTGTATCGGGGAATTCGTAGCTTTTG
TCATTGGATGGAATCTCATATTGGAATACGTTATTGGAACGGCTAGTGTT
TGTAGGGGTATCAGCCTGTACCTGGACTCCCTACTAAATGATACCCTGAA
ATACACATTCGCCGAGGTTGCTCCTATGAATGTCAGTTTCTTGGGCAGCT
ACTTTGACTTTTTGGCCTTTGGCCTAGTGGTTGTGTTTGGCGTTGCACTG
GCCTTTGGCGTGGAGACATCGACTATGGCAAATAATTTTGTGACGTGCCT
AAATATATTTATTTTGGGATTTGTCATAATCGCTGGCGCTTTAAAAGCTG
ACTATTCCAACTGGACGGTGGATCCGAGTACTGTGAGTGCGAATTCTACT
ATCGGATCTGGTGGGTTTTTCCCCTTTGGATTTGAAGGCACTCTTCGTGG
AGCAGCCACCTGCTTCTTTGGCTTTGTGGGATTCGATTGCATCGCCACCA
CAGGGGAAGAGGTCCGAAATCCTCGGAAAAATATCCCGAAATCGATTCTG
CTCTCACTGCTGATTATCTTTTTGTGCTATTTCGGAGTGTCCACTGTACT
GACATTGATGCTGCCATACTATATCCAGGATGTTAACGCACCACTGCCAT
ATGCCTTCGAGTATGTGGGTTGGCCAGTGGCCATGTGGATTGTCACCGTA
GGTGGTTTGGTGGGTCTGCTGGCCAGTCTCTTTGGAGCACTGTTCCCACT
GCCCAGGGTTATGTACTCGATGGCCCAGGATGGTCTTTTGTTTAAATTTC
TGGGCAAAGTGAGTCCGAGATTCCGAGTTCCAGTCACCGGATCTATTGTG
GCAGCTCTTTTCACGGCCGCAATTGCCGGACTCTTCGATTTGTCCCAACT
GGTCAGCCTGCTCTCAATCGGCACTTTATTGGCCTACAGCGTTGTGGCCA
TATCCATAATGCTTTTGCGATATATGGACTATTGTGAGGTTGACGAGAAT
CCAGGGCAGAGGGAAGTCAGAGCATCGGAAACCACTTCTTTAACTTCGAG
TTCCGAGCGATTCACGTTCGGTTCAGTATGCACACAACTGTTTAATGTTC
ATCGAGTCCAGGAGCCCAATGCAATATCGTCAAGAATTGTGGGAGTGCTT
TCAACATTGTTTTGCCTAATTTCCTTAGGCATAGGAGTGCTAATTATGCA
GGCTCATCTTTTAATCGCCTCCAAAGAAGTATGGGCCTTGACCCTCCTGA
TTGTGTTAGTCGTGCTGATGTTGCTGGTGATCTGTCTGATTTGCCTTCAG
CCCAGAGAAGCTCGTCGTAGATTATTTAGAGTTCCCTTTGTACCGATTGT
TCCTGCTATCAGTATCTTCATCAATATATATCTAATGCTTCAACTGGATA
CCTGGACGTGGATACGATTTGGAGTCTGGATGATTGTGGGACTTTCCATA
TACTTTTTCTACGGACTGCCCAACAGCTACAGAGAAATGAAGCGACAAAG
GGCCGGATGGCAGAAGCTCAAATACAGCGATCGTCTCGCAAGCTTTCTAG
ACCAT

BO34990.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:10:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG7255-RI 1824 CG7255-PI 1..1821 17..1837 9075 99.9 Plus
CG7255-RE 1824 CG7255-PE 1..1821 17..1837 9075 99.9 Plus
CG7255-RG 1824 CG7255-PG 1..1821 17..1837 9075 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:10:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG7255-RI 2225 CG7255-RI 265..2085 17..1837 9075 99.9 Plus
CG7255-RE 2946 CG7255-RE 986..2806 17..1837 9075 99.9 Plus
CG7255-RG 2920 CG7255-RG 960..2780 17..1837 9075 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:10:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15307673..15308491 646..1464 4095 100 Plus
3L 28110227 3L 15306954..15307241 255..542 1425 99.7 Plus
3L 28110227 3L 15308560..15308836 1464..1740 1370 99.6 Plus
3L 28110227 3L 15306558..15306799 17..258 1210 100 Plus
3L 28110227 3L 15307308..15307413 542..647 530 100 Plus
3L 28110227 3L 15310957..15311055 1739..1837 495 100 Plus
Blast to na_te.dros performed on 2014-11-28 15:10:04 has no hits.

BO34990.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-07 10:51:39 Download gff for BO34990.complete
Subject Subject Range Query Range Percent Splice Strand
CG7255-RG 960..2780 17..1839 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:32:51 Download gff for BO34990.complete
Subject Subject Range Query Range Percent Splice Strand
CG7255-RG 960..2780 17..1839 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:32:51 Download gff for BO34990.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15308560..15308835 1464..1739 99 -> Plus
3L 15310958..15311055 1740..1839 98   Plus
3L 15306558..15306798 17..257 100 -> Plus
3L 15306957..15307241 258..542 99 -> Plus
3L 15307309..15307413 543..647 100 -> Plus
3L 15307675..15308490 648..1463 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-07 10:51:39 Download gff for BO34990.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15300057..15300341 258..542 99 -> Plus
arm_3L 15300409..15300513 543..647 100 -> Plus
arm_3L 15299658..15299898 17..257 100 -> Plus
arm_3L 15300775..15301590 648..1463 100 -> Plus
arm_3L 15301660..15301935 1464..1739 99 -> Plus
arm_3L 15304058..15304155 1740..1839 98   Plus

BO34990.pep Sequence

Translation from 16 to 1855

> BO34990.pep
MVRQISPWKVLTRRKNLQADGSEGETKLNRVLGLWDLTALGVGSTLGAGV
YVLAGQIAKDQAGPSVMISFAIAALASLLAGVCYAEFGARVPKAGSAYVY
SYVCIGEFVAFVIGWNLILEYVIGTASVCRGISLYLDSLLNDTLKYTFAE
VAPMNVSFLGSYFDFLAFGLVVVFGVALAFGVETSTMANNFVTCLNIFIL
GFVIIAGALKADYSNWTVDPSTVSANSTIGSGGFFPFGFEGTLRGAATCF
FGFVGFDCIATTGEEVRNPRKNIPKSILLSLLIIFLCYFGVSTVLTLMLP
YYIQDVNAPLPYAFEYVGWPVAMWIVTVGGLVGLLASLFGALFPLPRVMY
SMAQDGLLFKFLGKVSPRFRVPVTGSIVAALFTAAIAGLFDLSQLVSLLS
IGTLLAYSVVAISIMLLRYMDYCEVDENPGQREVRASETTSLTSSSERFT
FGSVCTQLFNVHRVQEPNAISSRIVGVLSTLFCLISLGIGVLIMQAHLLI
ASKEVWALTLLIVLVVLMLLVICLICLQPREARRRLFRVPFVPIVPAISI
FINIYLMLQLDTWTWIRFGVWMIVGLSIYFFYGLPNSYREMKRQRAGWQK
LKYSDRLASFLDH

BO34990.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG7255-PI 607 CG7255-PI 1..607 1..607 3093 100 Plus
CG7255-PE 607 CG7255-PE 1..607 1..607 3093 100 Plus
CG7255-PG 607 CG7255-PG 1..607 1..607 3093 100 Plus
CG7255-PH 1063 CG7255-PH 1..579 1..579 2927 99.3 Plus
CG7255-PF 1063 CG7255-PF 1..579 1..579 2927 99.3 Plus