BO34993.complete Sequence
529 bp assembled on 2013-12-04
GenBank Submission: KX793875
> BO34993.complete
GAAGTTATCAGTCGACATGTTAGATGTTAATGATCTGGTTAAGGAGGAGT
TCGCCCTGGAGGATCCAAATGAGGAAGAGCACAATCAAAGAGACGAGGAA
GAGATAAGCTATCAATTGGCTGGCCAGCCAAAAATGTGTTCTACGTGCTT
GGAGGCTTTTCCCATCGACAACTTTTCATCTCACGCATGCTGGGACATCA
ATTGCGATCGATTCAGCTGCAAAATCTTCCCTCGAAAGTTTCGTTACAAG
TCATTGCTTAAAAAGCCACGTCAGACGGCAAAAGGGCGAGAGCATAGCGG
AACTGGATTTAGCGAAACCCACAGACTCCAGGACCAAGCCCAACTTCGAG
TTAAACTACTCACCCACTCCAAGGTGGAAGATATCTCGACGGAGAGCTGG
GATGCTGAAGCTCAACGAAATGCGTGTGCATCAACAACGCCTGTGCCTCT
ATTGCCCCATTGCCTTCTCAAACGAATCGCACCTGGAGAAGCACCTGAGG
GATCACCATGCGCAAGCTTTCTAGACCAT
BO34993.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:37:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14117-RD | 498 | CG14117-PD | 1..495 | 17..511 | 2475 | 100 | Plus |
| CG14117-RE | 285 | CG14117-PE | 1..285 | 17..297 | 1330 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:37:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14117-RD | 1049 | CG14117-RD | 289..783 | 17..511 | 2475 | 100 | Plus |
| CG14117-RE | 1053 | CG14117-RE | 289..787 | 17..511 | 2400 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:37:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13008936..13009184 | 263..511 | 1245 | 100 | Plus |
| 3L | 28110227 | 3L | 13008628..13008873 | 17..262 | 1230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:37:46 has no hits.
BO34993.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 09:59:23 Download gff for
BO34993.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14117-RD | 294..783 | 22..513 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:18:48 Download gff for
BO34993.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14117-RD | 294..783 | 22..513 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:18:48 Download gff for
BO34993.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13008936..13009184 | 263..513 | 99 | | Plus |
| 3L | 13008633..13008873 | 22..262 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 09:59:23 Download gff for
BO34993.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13002036..13002284 | 263..513 | 99 | | Plus |
| arm_3L | 13001733..13001973 | 22..262 | 100 | -> | Plus |
BO34993.pep Sequence
Translation from 16 to 529
> BO34993.pep
MLDVNDLVKEEFALEDPNEEEHNQRDEEEISYQLAGQPKMCSTCLEAFPI
DNFSSHACWDINCDRFSCKIFPRKFRYKSLLKKPRQTAKGREHSGTGFSE
THRLQDQAQLRVKLLTHSKVEDISTESWDAEAQRNACASTTPVPLLPHCL
LKRIAPGEAPEGSPCASFLDH
BO34993.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:47:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14117-PD | 165 | CG14117-PD | 1..165 | 1..165 | 891 | 100 | Plus |
| CG14117-PE | 94 | CG14117-PE | 1..82 | 1..82 | 450 | 100 | Plus |
