BO35011.complete Sequence
1438 bp assembled on 2014-03-03
GenBank Submission: KX794303
> BO35011.complete
GAAGTTATCAGTCGACATGGATATCAGCTATATCTTCGTCATCTGCCTGA
TGGCCCTGTGCAGCGGCGGCAGCAGTCTCAGCCAAGTCGAGGGCAAACAG
AAATCCGGAAGGGGCCGGGGCTCCATGTGGTGGGGCATTGCCAAGGTCGG
CGAACCCAACAACATTACGCCCATCATGTACATGGACCCAGCGATCCACT
CTACGTTGAGAAGGAAACAGCGACGCCTGGTCAGGGACAATCCCGGTGTA
CTGGGAGCCCTGGTCAAGGGCGCCAACTTGGCCATTAGCGAGTGCCAACA
CCAGTTCAGAAATCGCCGCTGGAACTGCTCGACGAGAAACTTCTCGAGGG
GCAAAAATCTATTCGGCAAAATCGTTGATCGAGGCTGCCGAGAGACGAGC
TTCATTTACGCAATCACCAGCGCGGCGGTGACCCACTCGATTGCCAGGGC
CTGCAGTGAAGGAACGATAGAGTCCTGCACCTGCGACTACAGCCACCAGT
CGAGATCTCCACAAGCGAACCACCAGGCGGGCAGTGTGGCCGGCGTGCGG
GATTGGGAGTGGGGCGGCTGCTCCGACAACATCGGATTCGGGTTCAAGTT
CTCCCGGGAATTCGTCGATACCGGCGAGAGGGGTCGCAATCTGCGCGAGA
AGATGAATCTGCACAACAACGAGGCGGGTCGAGCGCACGTCCAAGCGGAG
ATGCGACAGGAGTGCAAATGCCATGGCATGTCCGGATCGTGTACAGTGAA
GACCTGCTGGATGCGACTGGCCAACTTCCGTGTGATTGGCGACAATCTGA
AGGCCCGCTTCGATGGAGCCACCCGCGTGCAAGTGACCAACAGTCTCCGG
GCCACCAACGCTCTGGCCCCAGTTAGTCCGAATGCAGCCGGCTCGAATTC
CGTGGGCTCCAACGGCCTGATTATTCCGCAGTCTGGTCTGGTCTACGGCG
AGGAGGAGGAGCGTATGCTGAACGACCATATGCCGGACATCCTGCTAGAG
AACAGCCACCCGATCAGCAAGATCCATCACCCGAACATGCCGTCGCCCAA
CAGTTTGCCCCAGGCTGGTCAAAGGGGCGGACGAAATGGACGTCGTCAGG
GACGCAAGCATAATAGATATCACTTCCAACTGAACCCGCACAATCCCGAG
CACAAGCCACCCGGCTCGAAGGACCTTGTCTATCTGGAGCCTTCGCCGAG
CTTCTGCGAGAAGAACCTGCGGCAGGGCATCCTGGGAACCCATGGCCGCC
AGTGCAATGAGACCTCGCTGGGCGTCGACGGCTGTGGGCTGATGTGCTGT
GGGCGTGGCTATCGGCGAGACGAGGTCGTCGTTGTGGAGCGGTGCGCCTG
CACCTTCCACTGGTGCTGCGAGGTGAAGTGCAAGCTGTGTCGGACCAAAA
AGGTCATCTACACGTGTCTGGCAAGCTTTCTAGACCAT
BO35011.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:04:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wg-RA | 1407 | CG4889-PA | 1..1404 | 17..1420 | 7020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wg-RA | 2919 | CG4889-RA | 434..1837 | 17..1420 | 7020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:04:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7314317..7314748 | 685..1116 | 2160 | 100 | Plus |
| 2L | 23513712 | 2L | 7314878..7315183 | 1115..1420 | 1530 | 100 | Plus |
| 2L | 23513712 | 2L | 7312836..7313139 | 382..685 | 1520 | 100 | Plus |
| 2L | 23513712 | 2L | 7309385..7309637 | 132..384 | 1265 | 100 | Plus |
| 2L | 23513712 | 2L | 7307592..7307708 | 17..133 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:04:50 has no hits.
BO35011.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:26:03 Download gff for
BO35011.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wg-RA | 434..1837 | 17..1422 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:30:54 Download gff for
BO35011.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wg-RA | 434..1837 | 17..1422 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:30:54 Download gff for
BO35011.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7314880..7315183 | 1117..1422 | 99 | | Plus |
| 2L | 7307592..7307707 | 17..132 | 100 | -> | Plus |
| 2L | 7309386..7309636 | 133..383 | 100 | -> | Plus |
| 2L | 7312838..7313139 | 384..685 | 100 | -> | Plus |
| 2L | 7314318..7314748 | 686..1116 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:26:03 Download gff for
BO35011.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7314880..7315183 | 1117..1422 | 99 | | Plus |
| arm_2L | 7307592..7307707 | 17..132 | 100 | -> | Plus |
| arm_2L | 7309386..7309636 | 133..383 | 100 | -> | Plus |
| arm_2L | 7312838..7313139 | 384..685 | 100 | -> | Plus |
| arm_2L | 7314318..7314748 | 686..1116 | 100 | -> | Plus |
BO35011.pep Sequence
Translation from 16 to 1438
> BO35011.pep
MDISYIFVICLMALCSGGSSLSQVEGKQKSGRGRGSMWWGIAKVGEPNNI
TPIMYMDPAIHSTLRRKQRRLVRDNPGVLGALVKGANLAISECQHQFRNR
RWNCSTRNFSRGKNLFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGT
IESCTCDYSHQSRSPQANHQAGSVAGVRDWEWGGCSDNIGFGFKFSREFV
DTGERGRNLREKMNLHNNEAGRAHVQAEMRQECKCHGMSGSCTVKTCWMR
LANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAGSNSVGSNG
LIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQA
GQRGGRNGRRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCEKN
LRQGILGTHGRQCNETSLGVDGCGLMCCGRGYRRDEVVVVERCACTFHWC
CEVKCKLCRTKKVIYTCLASFLDH
BO35011.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:03:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wg-PA | 468 | CG4889-PA | 1..468 | 1..468 | 2557 | 100 | Plus |
| Wnt10-PB | 483 | CG4971-PB | 82..482 | 64..467 | 584 | 31.1 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 13..214 | 68..278 | 466 | 41.2 | Plus |
| Wnt2-PA | 352 | CG1916-PA | 40..241 | 68..278 | 466 | 41.2 | Plus |
| Wnt4-PB | 539 | CG4698-PB | 239..434 | 58..270 | 393 | 38.1 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 212..324 | 355..467 | 236 | 37.2 | Plus |
| Wnt2-PA | 352 | CG1916-PA | 239..351 | 355..467 | 236 | 37.2 | Plus |
