Clone BO35045 Report

Search the DGRC for BO35045

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:350
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG9926-RA
Protein status:BO35045.pep: Imported from assembly
Sequenced Size:727

Clone Sequence Records

BO35045.complete Sequence

727 bp assembled on 2013-12-04

GenBank Submission: KX796199

> BO35045.complete
GAAGTTATCAGTCGACATGGGACGTCGCCGTGCCAAGATGCCTAATTTCA
CCATTGGCGACTTTGTGTTCGCCAAGTTGCGCCGCTATCGCCCCTGGCCA
GGCCGCATCCTGAACCGCATCGGTGCCACGGCCTACAGTGTTTACTTCTA
TGGAAGCTGCAACTACGCCAAAGTGGCTCGCAAAGAGGTCGTCGACTACG
AGAAGAATCTGCATCGACTTGGAGTGGTCCAGCAAAAGGGACACGTCTGC
AATCCAAGTTTCCGGGCCTCCATGCTACAGGCACGCGAGGCATTCGACAA
TCCGGATAAAGATTACGGCTACTACCAGCAGTTGGCTGTGAACAACGGCG
ATTGCATTAACGCCGAGGACCTGGGACTGGAGTACCTGGTAACCGAAGAT
CTTGGCAACCTACTGGACGAACAGGCTGCCACGGAACAGGTGGTGGCGGA
GAAGGATGTCAACGAACAGGTAGCGGTGGAGCAGAATGTGGAGCTAAATT
CACTGGGGCAGATCTTTAGCAACCAGGAGCATGAGAAGGATTCAGAGGAT
TCTGCCTCGAATTGTCAGCTAGAGGAGAAGGATCAATCAAATTCGGAGGT
GGTGAAGGAGCAGGTCTCCGAACGGCATTACTCGATGGCTCAGATAGTTT
CTCTGAAATCGAAGAAACTGATGGATACTCCAATTAACATGACATGCCAA
CGGCGACGCGCAAGCTTTCTAGACCAT

BO35045.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:38:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG9926-RB 696 CG9926-PB 1..693 17..709 3345 98.8 Plus
CG9926-RA 696 CG9926-PA 1..693 17..709 3345 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG9926-RB 1685 CG9926-RB 61..753 17..709 3345 98.8 Plus
CG9926-RA 915 CG9926-RA 61..753 17..709 3345 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13950386..13951078 709..17 3345 98.8 Minus
Blast to na_te.dros performed on 2014-11-28 14:38:06 has no hits.

BO35045.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 09:59:31 Download gff for BO35045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9926-RA 61..753 17..711 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:18:58 Download gff for BO35045.complete
Subject Subject Range Query Range Percent Splice Strand
CG9926-RA 61..753 17..711 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:18:58 Download gff for BO35045.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13950384..13951078 17..711 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 09:59:31 Download gff for BO35045.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9776106..9776800 17..711 98   Minus

BO35045.pep Sequence

Translation from 16 to 727

> BO35045.pep
MGRRRAKMPNFTIGDFVFAKLRRYRPWPGRILNRIGATAYSVYFYGSCNY
AKVARKEVVDYEKNLHRLGVVQQKGHVCNPSFRASMLQAREAFDNPDKDY
GYYQQLAVNNGDCINAEDLGLEYLVTEDLGNLLDEQAATEQVVAEKDVNE
QVAVEQNVELNSLGQIFSNQEHEKDSEDSASNCQLEEKDQSNSEVVKEQV
SERHYSMAQIVSLKSKKLMDTPINMTCQRRRASFLDH

BO35045.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG9926-PB 231 CG9926-PB 1..231 1..231 1201 100 Plus
CG9926-PA 231 CG9926-PA 1..231 1..231 1201 100 Plus