BO35062.complete Sequence
289 bp assembled on 2013-12-04
GenBank Submission: KX797962
> BO35062.complete
GAAGTTATCAGTCGACATGGTGCTGCGACTGCTAATGCGCTACCTGGCCA
ACAACGAGCAGCTCATCCAGCGCATGGCGGAGAGCTATCCCATGAGACGC
GCTGCCCAGTTGGTCGTTTCCCTGATGTACCGCACAAAAGACTTGGCCCG
GGAGCAGGGACTGCACGAGATGACGCCAGAGCGTTTCAAATCCTTCGTTA
ACATGTTTAAGAACAACGTGCGCCAAGAGCTGGAGGGAGTGAAGAAGGAG
CTTAATAGCAAGAAAAAGAACGCAAGCTTTCTAGACCAT
BO35062.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:38:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42518-RB | 258 | CG42518-PB | 1..255 | 17..271 | 1275 | 100 | Plus |
CG42518-RA | 258 | CG42518-PA | 1..255 | 17..271 | 1275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED9-RC | 871 | CG42517-RC | 526..780 | 17..271 | 1275 | 100 | Plus |
CG42518-RB | 825 | CG42518-RB | 480..734 | 17..271 | 1275 | 100 | Plus |
CG42518-RA | 871 | CG42518-RA | 526..780 | 17..271 | 1275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18167966..18168138 | 17..189 | 865 | 100 | Plus |
2R | 25286936 | 2R | 18168208..18168289 | 190..271 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:38:09 has no hits.
BO35062.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 09:59:34 Download gff for
BO35062.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED9-RC | 526..768 | 17..259 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:18:59 Download gff for
BO35062.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42518-RA | 526..768 | 17..259 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:18:59 Download gff for
BO35062.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18167966..18168138 | 17..189 | 100 | -> | Plus |
2R | 18168208..18168277 | 190..259 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 09:59:34 Download gff for
BO35062.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14055471..14055643 | 17..189 | 100 | -> | Plus |
arm_2R | 14055713..14055782 | 190..259 | 100 | | Plus |
BO35062.pep Sequence
Translation from 16 to 289
> BO35062.pep
MVLRLLMRYLANNEQLIQRMAESYPMRRAAQLVVSLMYRTKDLAREQGLH
EMTPERFKSFVNMFKNNVRQELEGVKKELNSKKKNASFLDH
BO35062.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42518-PB | 85 | CG42518-PB | 1..85 | 1..85 | 424 | 100 | Plus |
CG42518-PA | 85 | CG5134-PB | 1..85 | 1..85 | 424 | 100 | Plus |