BO35063.complete Sequence
391 bp assembled on 2013-12-04
GenBank Submission: KX794489
> BO35063.complete
GAAGTTATCAGTCGACATGGCACACACTGGCGGGAACCTATCCGGTAACA
TGCAGCCGCCACCGCCTTCCGGAGGCAGGTTCTCCGTGGACATGCAAAGC
CTGCCCTCGCTATCCAACCTGCCATCACCGCTGCAGATCTTCCAAATGGT
CCGAAACTCCCTGCGGCCCTGGGTAGTCTTCTTCAACATCAACAATTTCA
AAACGGCCATCAGCATGCAGCGGCTAAATAGCCGGGTTATTCGGAATCTC
TCCTATTTTCAGGCCAACTACGTTTTCATCTTTTTTGTACTGATGATATA
CTGCCTTTATAATCTTAAGCATCACGGCTCCCTGCATTCTGCTGGTCATC
CTGGCTTCCGCTTTTGGCTGCCAGCAAGCTTTCTAGACCAT
BO35063.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:38:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1418-RA | 582 | CG1418-PA | 1..344 | 17..373 | 1555 | 96.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:38:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1418-RA | 1128 | CG1418-RA | 352..695 | 17..373 | 1555 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9964375..9964583 | 306..98 | 1045 | 100 | Minus |
2R | 25286936 | 2R | 9964634..9964716 | 99..17 | 415 | 100 | Minus |
2R | 25286936 | 2R | 9964268..9964334 | 373..307 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:38:14 has no hits.
BO35063.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 09:59:35 Download gff for
BO35063.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1418-RB | 352..708 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:19:01 Download gff for
BO35063.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1418-RA | 352..641 | 17..306 | 100 | == | Plus |
CG1418-RA | 642..695 | 320..375 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:19:01 Download gff for
BO35063.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9964266..9964334 | 307..375 | 97 | <- | Minus |
2R | 9964375..9964581 | 100..306 | 100 | <- | Minus |
2R | 9964634..9964716 | 17..99 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 09:59:35 Download gff for
BO35063.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5851771..5851839 | 307..375 | 97 | <- | Minus |
arm_2R | 5851880..5852086 | 100..306 | 100 | <- | Minus |
arm_2R | 5852139..5852221 | 17..99 | 100 | | Minus |
BO35063.pep Sequence
Translation from 16 to 391
> BO35063.pep
MAHTGGNLSGNMQPPPPSGGRFSVDMQSLPSLSNLPSPLQIFQMVRNSLR
PWVVFFNINNFKTAISMQRLNSRVIRNLSYFQANYVFIFFVLMIYCLYNL
KHHGSLHSAGHPGFRFWLPASFLDH
BO35063.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1418-PA | 193 | CG1418-PA | 1..97 | 1..97 | 508 | 100 | Plus |