Clone BO35092 Report

Search the DGRC for BO35092

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:350
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptNeto-RB
Protein status:BO35092.pep: Imported from assembly
Sequenced Size:2500

Clone Sequence Records

BO35092.complete Sequence

2500 bp assembled on 2015-04-29

GenBank Submission: KX796074

> BO35092.complete
GAAGTTATCAGTCGACATGCGAAGAAGAGGAAGCACTTGCAGCGCACAAC
AACCACAGCAGCGGCCACACAAACAGCAGCAGCAGCAGCAGCAGCAAAAT
CAAAGGTTAATCCCCGGCCAACGCTGTTCGCTGCTAATGTTGCTAATTGT
TGGCCAAGCAGTTTACGCTTCTGCCGGCAGTGAGATAATCGCAAATCGTT
CGGCTTCAGCTGGCGAATCGTTGATAATGCTGTCGAATTTCACCGTTGCC
ACGCCGCCTCCCGCCCCAAGATTCACCAGTCCCTTTCGGGAGCAGGATGT
GGCTGAGGGGGAGGAGTTGGCGGGTGGAGGGCAGGTCGATTGGTTGGACG
AGCAGCATCCGCTGACCATTTCCCGACCGCCAAGAGCAGGACGCAGCGAG
CGGCAGGCAGAAGAGGATCAGGTGGACCGCTGTCGTCTCTTTGTCGAGGG
GGATCCCACCAAGAATGAGCTGTACAGCCCCGAGTATCCCAACTTGTATC
CGAAGAACATCAACTGCACCCGGGTGATAACAGCGCCAAAGGGACAAATC
ATACGCCTGGACTTTCGCAACTCGTTTAATATCGAGGCCAAGGAGGGGTG
CAAATTTGATTTTCTCGAAATACGAGATGGCCAGTACGGTTTCTCTACGC
TGATTGGCAAGTTCTGCGGCACCGACTTTCCGCCGGAGATCACCTCGAAG
GAGCGGTATTTGTGGCTTCATTTCCACTCCGACGAGACCATCGAGTACAC
CGGATTCAGTGCGGTCTATGAGTATCTGGACAGGAGTCGGGATGCGCCCA
GCACCGATCTCAACTGCACCATCGATAAGGGCGGCTTCGAGGGCTTCATC
AACTCCACGGATGTTCCGGCCGAGATCTGGGAGCAGGTCAATCGCAATAA
GATCGCGCTGGACTGCATCTGGCGCATTCAGGTCAAGGAGAATTGGAAGA
TATTTCTCAAGTTTCTGGACTTCAAGCTGAGCAAGCCGAACGATTGTCAA
ACCAACTTCCTGGATATATTCCCGGAGCAGACGGTGATGCCACTGAGGGT
TAAGAACTTTTGCGGTTCAGCTGGCGAGAGTATTACGGCGGAGTCAAATA
TCCTGCACTTGCGCTTCTACGCAGATCAAACCGCGATTAACTCGACATTT
GGCATTCTGTTCACGGCGTTCCGGGAACGTGGAGCTGCCTGCACCGAGGA
CGAGTACGATTGCGAGGACGCGACCTGCATATCAAAGGATTTGAAATGTA
ATAACCTAGACAATTGTAAATTTCGATGGGACGAGGAGGGCTGCACGAGC
GAGGCGGCCGGCCAATCGGAGCACGTGGTCATCATCGTGATTGTGTTTGG
CCTGATACTCGGCGGAATGGTCATTACGTTCATCGTCAATTGCATACGCA
AGATAATACGTGATCAGAAGATAATACGCGAGCACATCCGAGAGTCGAAG
GAGAGCAAGCTGGACGAGATGGGCCGCAACTCCAAGGGACGCTCGCGGGA
GAATATATCCAGGCAAAAGCACTCGCAAACATCGCTGCAGATCCTGGATG
ATGTATCCAATCGATACTATCGCGAGGCGGTTCCACTATCGTCGCAGTCC
AGTAAGGCGGACTTCAAGGAGAAGGAGCACAGCATTCTGCGCCGCCATGC
CGATATGACGCAAACAAGTCTCTGCGGCGTTGGCGAGGATGATGGCGAAT
CCTCATCGACGACGACGGCCACACACGAGATGATGACTAAGGCGGCCATG
TCGGCGGTGCCCTCCAATGCATGCGACATGGGCTGTCAGACGAGGGAATC
GCTGTTTGTCAACAGTCCCGGAATTGGACCGTCGGCGGGTCCTGGTGTTG
GTGTTGCTGTTGGCATCGGTATCGCCGTCGCTCCCGGCGGCGGTGTTGCC
ACGCTAATGAGACAAAAGTCCAGCTCCTCATCGCTGGGCGTTGGTGGTGG
CGCTGGGGGCGGGGCCATGATGATGCCGCCCCCGCCACCGCGATTCTTCT
CCACCTTTGGCTATGAGCCATCGGGATCGCCGGCGGTGGCAACGCTGACA
AGGCGCAGCATGCACCAGCAGCAGCAACATCCGCAGATGCCGCGCCAAGA
GTCCATGGAGATGGAGGAGCGACACAGCGGCCGCTCGCACTACGGCGGCC
TGCTGGTGACCTCGACGGCCAAGCAGCCGCAGGAGATCTGTCACCATCAT
CACCAGCATCAGCAGCAGCATCAGCAGCAGCATCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAACAGCAACAGCAGCAGCGCATGCACCATGCACATCCGC
ATCCGCCGAGTATTGCTGCACGTTTGCCTGCGATGAAGGGGCATGGAACA
GTCATGGGACAGACTACGATCCTGCCCGGCGGCAACAAGCAGCAGCAGCA
ACATCAGCAAAAGAACGAGGAGTCCAAAGTGTTTATCGACATACGGAATT
CAGCGCCAGACGTGATTATCATGACGTCCCATGCAAGCTTTCTAGACCAT

BO35092.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2015-04-29 20:18:07
Subject Length Description Subject Range Query Range Score Percent Strand
Neto-RB 2469 CG44328-PB 1..2466 17..2482 12315 100 Plus
Neto-RA 2034 CG44328-PA 1..1415 17..1431 7075 100 Plus
wake-RG 4947 CG45058-PG 610..696 2192..2278 255 86.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:18:08
Subject Length Description Subject Range Query Range Score Percent Strand
Neto-RB 6903 CG44328-RB 597..3062 17..2482 12315 100 Plus
Neto-RA 3362 CG44328-RA 597..2011 17..1431 7075 100 Plus
wake-RH 6723 CG45058-RH 983..1069 2192..2278 255 86.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-04-29 20:18:04
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13522752..13523441 1793..2482 3450 100 Plus
X 23542271 X 13495840..13496206 167..533 1835 100 Plus
X 23542271 X 13500494..13500823 620..949 1650 100 Plus
X 23542271 X 13520899..13521184 1510..1795 1415 99.7 Plus
X 23542271 X 13483136..13483286 17..167 755 100 Plus
X 23542271 X 13502457..13502598 1046..1187 710 100 Plus
X 23542271 X 13506098..13506231 1297..1430 670 100 Plus
X 23542271 X 13504034..13504144 1187..1297 555 100 Plus
X 23542271 X 13500949..13501049 948..1048 505 100 Plus
X 23542271 X 13499794..13499883 530..619 450 100 Plus
X 23542271 X 13520518..13520601 1430..1513 420 100 Plus
3R 32079331 3R 22658293..22658379 2192..2278 255 86.2 Plus
2R 25286936 2R 13823854..13823936 2274..2192 220 84.3 Minus
X 23542271 X 10700026..10700112 2192..2278 210 82.8 Plus
2R 25286936 2R 13823876..13823963 2279..2192 200 81.8 Minus
3L 28110227 3L 6080302..6080359 2222..2279 185 87.9 Plus
Blast to na_te.dros performed 2015-04-29 20:18:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6941 2055..2279 286 64.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2671 2038..2415 266 58.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6523..6891 2053..2415 203 58.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6785..7035 2019..2274 166 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6788..7034 2056..2303 164 57.3 Plus

BO35092.complete Sim4 Records

Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:18:48 Download gff for BO35092.complete
Subject Subject Range Query Range Percent Splice Strand
Neto-RB 597..3062 17..2484 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-29 20:18:48 Download gff for BO35092.complete
Subject Subject Range Query Range Percent Splice Strand
X 13483136..13483286 17..167 100 -> Plus
X 13520902..13521183 1513..1794 99 -> Plus
X 13495841..13496206 168..533 100 -> Plus
X 13499798..13499883 534..619 100 -> Plus
X 13500494..13500823 620..949 100 -> Plus
X 13500951..13501048 950..1047 100 -> Plus
X 13502459..13502598 1048..1187 100 -> Plus
X 13504035..13504144 1188..1297 100 -> Plus
X 13506099..13506230 1298..1429 100 -> Plus
X 13520518..13520600 1430..1512 100 -> Plus
X 13522754..13523441 1795..2484 99   Plus

BO35092.pep Sequence

Translation from 16 to 2500

> BO35092.pep
MRRRGSTCSAQQPQQRPHKQQQQQQQQNQRLIPGQRCSLLMLLIVGQAVY
ASAGSEIIANRSASAGESLIMLSNFTVATPPPAPRFTSPFREQDVAEGEE
LAGGGQVDWLDEQHPLTISRPPRAGRSERQAEEDQVDRCRLFVEGDPTKN
ELYSPEYPNLYPKNINCTRVITAPKGQIIRLDFRNSFNIEAKEGCKFDFL
EIRDGQYGFSTLIGKFCGTDFPPEITSKERYLWLHFHSDETIEYTGFSAV
YEYLDRSRDAPSTDLNCTIDKGGFEGFINSTDVPAEIWEQVNRNKIALDC
IWRIQVKENWKIFLKFLDFKLSKPNDCQTNFLDIFPEQTVMPLRVKNFCG
SAGESITAESNILHLRFYADQTAINSTFGILFTAFRERGAACTEDEYDCE
DATCISKDLKCNNLDNCKFRWDEEGCTSEAAGQSEHVVIIVIVFGLILGG
MVITFIVNCIRKIIRDQKIIREHIRESKESKLDEMGRNSKGRSRENISRQ
KHSQTSLQILDDVSNRYYREAVPLSSQSSKADFKEKEHSILRRHADMTQT
SLCGVGEDDGESSSTTTATHEMMTKAAMSAVPSNACDMGCQTRESLFVNS
PGIGPSAGPGVGVAVGIGIAVAPGGGVATLMRQKSSSSSLGVGGGAGGGA
MMMPPPPPRFFSTFGYEPSGSPAVATLTRRSMHQQQQHPQMPRQESMEME
ERHSGRSHYGGLLVTSTAKQPQEICHHHHQHQQQHQQQHQQQQQQQQQQQ
QQQQRMHHAHPHPPSIAARLPAMKGHGTVMGQTTILPGGNKQQQQHQQKN
EESKVFIDIRNSAPDVIIMTSHASFLDH

BO35092.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2015-04-29 20:18:28
Subject Length Description Subject Range Query Range Score Percent Strand
Neto-PB 822 CG44328-PB 1..822 1..822 4347 100 Plus
Neto-PA 677 CG44328-PA 1..472 1..472 2506 99.8 Plus
tld-PA 1067 CG6868-PA 492..746 154..378 250 29.6 Plus
tok-PC 1464 CG6863-PC 847..1111 146..382 247 29.3 Plus
tok-PA 1464 CG6863-PA 847..1111 146..382 247 29.3 Plus
tok-PC 1464 CG6863-PC 1169..1434 152..423 202 23 Plus
tld-PA 1067 CG6868-PA 618..873 123..350 192 25.1 Plus
tld-PA 1067 CG6868-PA 389..578 166..372 184 27.3 Plus
tok-PC 1464 CG6863-PC 751..1003 166..436 183 24.5 Plus
tld-PA 1067 CG6868-PA 895..1049 124..280 163 28.9 Plus