BO35101.complete Sequence
2080 bp assembled on 2014-03-03
GenBank Submission: KX799534
> BO35101.complete
GAAGTTATCAGTCGACATGTCTCGCTCGGACGCTTTGGTCCAGAGTCCAA
CGGACTTAAGTCGGTCAGTCGAGGAAGCAAGTCTTAGAATTGTGTATCCA
GAGGCACGAAAGGATGGAAGATTCGAAGAAATGATACACGGGTATAAAAT
AAAAGACGTTTATCGGTGGCTTGAAGATCCAGACTCTGTAGACACTCAAC
AATTTGTGAATGCGCAGAACAACATTAGCCAATCCTTCCTTGAAAGAAGT
GCGGAACGGGAGAATATCAATTCCAAACTGACAAAGCTGTGGAATTTCCC
GAAGTATGGGTGTCCCATGCGTCACGGTAACTACTATTATTTTTTTAAGA
ATACTGGCCTGCAAAATCAGAGTGTTTTGATGCAGCAAAAGACTTTAGAG
AGCCCAGAGTCTATTTTCCTTGACACCAATAGCATATCTTCCGATGGAAC
CACTGCAATTAGCCATATCAAGTTCTCGGAAGATGGGGCGTTCATGGCCT
ATGGACTGAGCGAAAGTGGTTCCGATTGGAATAAAATCCGAATACGAAAT
ACCAAGGAAGGTATCGACTTACCTGAAATTCTGGAAAAAGTGAAGTTCTC
TAATGTCTCCTGGACGAAAGACAGCAAGGGATTCTTCTATGGTCGATATA
CCGATCAAGACGGGATATTTGACGGATCAGAAACAAAGCTGGCTGAGAAT
CAGAAACTGTATTACCATCTACTAGGAGAGAGCCCCCATCAAGATATATT
GATCGCAGAGTTCCCCGAACACCCGTCTTGGCGATTCAAAACCGATATTT
CCGACTGCGGAAAATACCTTATCTTATCGATAAGTCACACGGTTCGTGAC
AATATGCTGTACTATGCTGAATTAGGATCGGAAGAGAAAAACGCATTCCA
ACTGGAACTTAAGCCAATTGTAGATAAATTTGAGGCTGACTTCGATTACA
TTACCAACGAGGGGTCTAATTTGTACTTCCACACAAACAAGGATGCCCCT
AATTACCGGGTGATTGTGATTGATGTTAATAATCCAGCAGAGGAACACTG
GACCACCCCAATACCCGAGCATAAGAAAGATGTTTTGGAGTGGGCCAAGT
GCGTTGATGGGAATAAATTAGTCGTTTGCTATAACTGTGATGTAAAGCAT
ATTCTTCAAGCCCGCGATCTTAGCACAGGAAAGCTCATCCGTCAATTTGG
CCTGGATATTGGCTCAATAAATGGGATTTCAGGAAAGAAGAGTAATTCGG
AAATATTTTATGGTTTCTCATCGTTCTTATCACCAGGTATAATATTTTAC
TATGACTTTGCCAAACCATCCGAAAAGCCGACAGTTCTGCGCGAAATTAG
TCTAAATTTGGAGGGCTTTAGCCGGGATAACTACAGCGTGGAACAAGTGT
TTTATAAAAGCACTGATGACACCGATATACCTATGTTTATTGTACAACGA
AAGAGAGATATTGCGGAACCCCGCCCTTGTTTACTATACGGATATGGTGG
ATTTAACTACAGCCTAATGCCATCCTTCGGCATACTGAGTCTGATGTTCA
TGGATACGTTTGATGGAGTTTTGGCTTTTCCAAATTTGAGAGGAGGCGGA
GAATATGGCATGGAATGGCACAATGGGGGTAGAATGTTGAGCAAACAAAA
CGTTTTTAATGATTTTCAAGCCGCCGCTGAGTTTTTGACCAAGAATAACT
ATACAACCAAGGATCGATTGGCTATACAGGGCGCCTCGAATGGTGGACTT
TTGGTGGGTGCTTGCATCAATCAGCGTCCTGATCTTTTCGGAGCGGCCGT
GGCCCAAGTTGGTGTAATGGATATGTTGCGATTCCACAAGTTTACTATCG
GTCATGCCTGGTGTTCCGATTATGGCAATCCCGATGAAAAGGTACACTTC
GCGAATCTTATTAAATTCTCGCCTCTTCACAACGTTCATATTCCTCTGAA
TCCAAATCAGGAGTACCCATCGACATTAATTCTGACAGCCGATCACGACG
ACCGTGTAAGTCCTTTGCACTCCTATAAATTTGTTGCTGCCCTTCAGGAA
GCTGTTCACACAGCAAGCTTTCTAGACCAT
BO35101.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:00:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2528-RE | 2196 | CG2528-PE | 1..2036 | 17..2052 | 10180 | 100 | Plus |
| CG5355-RA | 2271 | CG5355-PA | 1603..2116 | 1544..2057 | 560 | 73.9 | Plus |
| CG5355-RA | 2271 | CG5355-PA | 975..1167 | 916..1108 | 260 | 75.6 | Plus |
| CG5355-RA | 2271 | CG5355-PA | 220..425 | 167..372 | 205 | 73.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2528-RE | 2342 | CG2528-RE | 55..2090 | 17..2052 | 10180 | 100 | Plus |
| CG5355-RA | 2404 | CG5355-RA | 1636..2149 | 1544..2057 | 560 | 73.9 | Plus |
| CG5355-RA | 2404 | CG5355-RA | 1008..1200 | 916..1108 | 260 | 75.6 | Plus |
| CG5355-RA | 2404 | CG5355-RA | 253..458 | 167..372 | 205 | 73.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:00:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21990834..21992879 | 2062..17 | 10230 | 100 | Minus |
| 2L | 23513712 | 2L | 10411091..10411359 | 1812..1544 | 325 | 74.7 | Minus |
| 2L | 23513712 | 2L | 10410792..10411037 | 2057..1812 | 240 | 73.2 | Minus |
| 2L | 23513712 | 2L | 10412901..10413106 | 372..167 | 205 | 73.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:00:49 has no hits.
BO35101.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:35 Download gff for
BO35101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2528-RC | 55..2100 | 17..2064 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:29:17 Download gff for
BO35101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2528-RE | 55..2093 | 17..2055 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:29:17 Download gff for
BO35101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21990831..21992879 | 17..2064 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:35 Download gff for
BO35101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21990831..21992879 | 17..2064 | 99 | | Minus |
BO35101.pep Sequence
Translation from 16 to 2080
> BO35101.pep
MSRSDALVQSPTDLSRSVEEASLRIVYPEARKDGRFEEMIHGYKIKDVYR
WLEDPDSVDTQQFVNAQNNISQSFLERSAERENINSKLTKLWNFPKYGCP
MRHGNYYYFFKNTGLQNQSVLMQQKTLESPESIFLDTNSISSDGTTAISH
IKFSEDGAFMAYGLSESGSDWNKIRIRNTKEGIDLPEILEKVKFSNVSWT
KDSKGFFYGRYTDQDGIFDGSETKLAENQKLYYHLLGESPHQDILIAEFP
EHPSWRFKTDISDCGKYLILSISHTVRDNMLYYAELGSEEKNAFQLELKP
IVDKFEADFDYITNEGSNLYFHTNKDAPNYRVIVIDVNNPAEEHWTTPIP
EHKKDVLEWAKCVDGNKLVVCYNCDVKHILQARDLSTGKLIRQFGLDIGS
INGISGKKSNSEIFYGFSSFLSPGIIFYYDFAKPSEKPTVLREISLNLEG
FSRDNYSVEQVFYKSTDDTDIPMFIVQRKRDIAEPRPCLLYGYGGFNYSL
MPSFGILSLMFMDTFDGVLAFPNLRGGGEYGMEWHNGGRMLSKQNVFNDF
QAAAEFLTKNNYTTKDRLAIQGASNGGLLVGACINQRPDLFGAAVAQVGV
MDMLRFHKFTIGHAWCSDYGNPDEKVHFANLIKFSPLHNVHIPLNPNQEY
PSTLILTADHDDRVSPLHSYKFVAALQEAVHTASFLDH
BO35101.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:00:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2528-PE | 731 | CG2528-PE | 1..685 | 1..685 | 3621 | 99.3 | Plus |
| CG5355-PA | 756 | CG5355-PA | 33..710 | 11..685 | 2511 | 68 | Plus |
