Clone BO35119 Report

Search the DGRC for BO35119

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG43329-RA
Protein status:BO35119.pep: Imported from assembly
Sequenced Size:616

Clone Sequence Records

BO35119.complete Sequence

616 bp assembled on 2013-12-04

GenBank Submission: KX794007

> BO35119.complete
GAAGTTATCAGTCGACATGCGCTTATACTTGACCTTTTTTGGAATATCAA
TAGTTTTTTTGGCGACCTTGCTTCAAATTCTTGCCATACACAGCACTGGG
AATTGCACCTTCGCAAAGAATGTCACTCTAAAGTTCGTGTGCAAGGGAAA
TGTCCCCAAGGATATGTATACAATGTTTCGGGACAACCGAGCTCCTCCCG
ACACTCCCTACAGTGTTTGGCAGACCGAAGAGGACGACTCTGCTCTTCTG
GTATCGTTTTACACCACGATGTTTCCAAACTATGATACCATCAATCTGCA
GGAAGGCGAGATGGATCTTGGCCAATTCTTTCTAGCCACCAAGGGAAGAA
ATACCAACGATCTTTTGTTTGTGACACCGTCTACCCTCCACTGCTTCCCC
TTCGGTCTGCGCTATACGAATGAGCTAAAAAGGCACTGTCTGGGCCAAGA
CATAAGTGAGGGAGGTGTCCTTACCAAGAAGCCCATTATTCACTACGGCT
CGCTTAGCATAAAAACCCCCGACTTGCCGAAGAGTGATGCAACTTCGACA
AGTGTGAAAAGAAACCTGCTTCTTGTCGTGTGTGCGGTGATCACTTACGC
AAGCTTTCTAGACCAT

BO35119.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:39:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG43329-RA 585 CG43329-PA 1..582 17..598 2910 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG43329-RA 732 CG43329-RA 41..622 17..598 2910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22504597..22505178 598..17 2910 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:39:21 has no hits.

BO35119.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:02 Download gff for BO35119.complete
Subject Subject Range Query Range Percent Splice Strand
CG43329-RA 41..622 17..600 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:19:32 Download gff for BO35119.complete
Subject Subject Range Query Range Percent Splice Strand
CG43329-RA 41..622 17..600 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:19:32 Download gff for BO35119.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22504595..22505178 17..600 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:02 Download gff for BO35119.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22497695..22498278 17..600 99   Minus

BO35119.pep Sequence

Translation from 16 to 616

> BO35119.pep
MRLYLTFFGISIVFLATLLQILAIHSTGNCTFAKNVTLKFVCKGNVPKDM
YTMFRDNRAPPDTPYSVWQTEEDDSALLVSFYTTMFPNYDTINLQEGEMD
LGQFFLATKGRNTNDLLFVTPSTLHCFPFGLRYTNELKRHCLGQDISEGG
VLTKKPIIHYGSLSIKTPDLPKSDATSTSVKRNLLLVVCAVITYASFLDH

BO35119.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG43329-PA 194 CG43329-PA 1..194 1..194 1023 100 Plus