Clone BO35124 Report

Search the DGRC for BO35124

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG10731-RA
Protein status:BO35124.pep: Imported from assembly
Sequenced Size:643

Clone Sequence Records

BO35124.complete Sequence

643 bp assembled on 2013-12-04

GenBank Submission: KX797351

> BO35124.complete
GAAGTTATCAGTCGACATGTTGTTGTTAAATAAGCTGCCCAGGATAACGC
AACTACTCGCCAGAGATCCCAAGGATCAGCGAGGCATCTGGGGCTATGTG
GCTGTCGCCTTCAACCAGGTGGACGCGGAACGTCTGTCGAAAGTGGGTGC
CAACCGCCTGTGCGCCGAGTGGATTATTAAAAACGGAGGCGGAGTGCGCT
TTGTGGAGAGTCCCTCCAGGCTGTGGAAGGATTACAACTCGTTGCCGGGA
GAGAACACGCAGTTCTGCATCAAAGTGGTGGACGCGTCAAATTCGTCAAT
CATGAAAATAGGACTGGAGCACTTAAAGGACTGCCGGAGCATCGATACAG
TCATCTTCCACAATTGCAAGCACTTGGAGAACGATGGCTTGGAGGGACTT
CATCACATCAGCAGCTCCCTGCAGCGACTCCAGGTCTCCGGATGTTACAA
CATCACGGATTCCGGTCTTGCTGTGATCGGGGAGCTCAAGAATCTGCGAC
AACTGCTCATATTCGATATGATTTTCGTGAAGAACATGGAGGCTGTAGCC
GCCTCTCTGAAAAAACAGCTTCCCAGCTGTGATATCAAGGCTACCAAGAT
GGGCCTAACTCTGAAGCCCAAAGAAGCAAGCTTTCTAGACCAT

BO35124.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:39:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG10731-RB 612 CG10731-PB 1..609 17..625 3045 100 Plus
CG10731-RC 612 CG10731-PC 1..609 17..625 3045 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG10731-RB 828 CG10731-RB 26..634 17..625 3045 100 Plus
CG10731-RC 984 CG10731-RC 182..790 17..625 3045 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:38:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16149006..16149614 625..17 3045 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:38:59 has no hits.

BO35124.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 09:59:52 Download gff for BO35124.complete
Subject Subject Range Query Range Percent Splice Strand
Ext2-RA 31..634 22..627 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:19:24 Download gff for BO35124.complete
Subject Subject Range Query Range Percent Splice Strand
CG10731-RC 187..790 22..627 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:19:24 Download gff for BO35124.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16149004..16149609 22..627 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 09:59:52 Download gff for BO35124.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12036509..12037114 22..627 99   Minus

BO35124.pep Sequence

Translation from 16 to 643

> BO35124.pep
MLLLNKLPRITQLLARDPKDQRGIWGYVAVAFNQVDAERLSKVGANRLCA
EWIIKNGGGVRFVESPSRLWKDYNSLPGENTQFCIKVVDASNSSIMKIGL
EHLKDCRSIDTVIFHNCKHLENDGLEGLHHISSSLQRLQVSGCYNITDSG
LAVIGELKNLRQLLIFDMIFVKNMEAVAASLKKQLPSCDIKATKMGLTLK
PKEASFLDH

BO35124.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG10731-PB 203 CG10731-PB 1..203 1..203 1052 100 Plus
CG10731-PC 203 CG10731-PC 1..203 1..203 1052 100 Plus