BO35127.complete Sequence
334 bp assembled on 2013-12-04
GenBank Submission: KX799017
> BO35127.complete
GAAGTTATCAGTCGACATGACCTATCAAACGGATACAATGCTGAAGTTGG
TCGAAAAGCTTTTCCAACTGTTGCGACCCAGGATGTGTCAGTTTTCACAA
TCCAACAAGAACATATCCAAGCATTTGTTCGAAAAAGCCAGGGCGGAGGA
GAACATACATTTCCTTAAACTGCAACGGGAACAGCTGAAGTCGTTGCGAG
AAAAGATTCTCAGCCAGAAGAACGAAGTCACAACAAAGATCATCAAGGTG
GATAAGCAGATACAATCGTTGGAAAAAACCAAGACCGAAGGCTCACAGAT
GAACCATGAACAAAATGCAAGCTTTCTAGACCAT
BO35127.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:39:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42560-RB | 282 | CG42560-PB | 1..279 | 38..316 | 1395 | 100 | Plus |
CG42560-RA | 282 | CG42560-PA | 1..279 | 38..316 | 1395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42560-RA | 880 | CG42560-RA | 556..855 | 17..316 | 1500 | 100 | Plus |
CG42559-RA | 880 | CG42559-RA | 556..855 | 17..316 | 1500 | 100 | Plus |
CG42560-RB | 410 | CG42560-RB | 100..385 | 31..316 | 1430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23599551..23599695 | 316..172 | 725 | 100 | Minus |
2R | 25286936 | 2R | 23599879..23599957 | 109..31 | 395 | 100 | Minus |
2R | 25286936 | 2R | 23599757..23599820 | 172..109 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:39:48 has no hits.
BO35127.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:11 Download gff for
BO35127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RA | 556..855 | 17..318 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:19:43 Download gff for
BO35127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42559-RA | 556..855 | 17..318 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:19:43 Download gff for
BO35127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23599549..23599694 | 173..318 | 98 | <- | Minus |
2R | 23599757..23599820 | 109..172 | 100 | <- | Minus |
2R | 23599880..23599956 | 32..108 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:11 Download gff for
BO35127.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19487072..19487217 | 173..318 | 98 | <- | Minus |
arm_2R | 19487280..19487343 | 109..172 | 100 | <- | Minus |
arm_2R | 19487403..19487479 | 32..108 | 100 | <- | Minus |
BO35127.pep Sequence
Translation from 16 to 334
> BO35127.pep
MTYQTDTMLKLVEKLFQLLRPRMCQFSQSNKNISKHLFEKARAEENIHFL
KLQREQLKSLREKILSQKNEVTTKIIKVDKQIQSLEKTKTEGSQMNHEQN
ASFLDH
BO35127.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42560-PB | 93 | CG42560-PB | 1..93 | 8..100 | 462 | 100 | Plus |
CG42560-PA | 93 | CG42560-PA | 1..93 | 8..100 | 462 | 100 | Plus |