Clone BO35129 Report

Search the DGRC for BO35129

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:29
Vector:pDNR-Dual
Associated Gene/Transcriptdia-RC
Protein status:BO35129.pep: Imported from assembly
Sequenced Size:424

Clone Sequence Records

BO35129.complete Sequence

424 bp assembled on 2013-12-04

GenBank Submission: KX797200

> BO35129.complete
GAAGTTATCAGTCGACATGCGCCTCAAAAAGCTGGGAATGTCTCGTCACG
AGAAAACGAAATCCACGGGCGGCGGGCTCCTGGACAGTCTGTTCGGAAGA
CCCTCGAAGTCCAAGGGAGGAACCATCAGCAGTGGCACCCTGGCCCATGG
CGGACGACCCGTGTCCGCGGACAACTATGTGGTGCCGGGCGTGGAGGACT
TTGAGCAGTACATCCAGCAGCTAAGCGTTGCGGAGCTGGATGCGAAGTTT
CTGGAGATCATCGAGGACATGAACATTCCGAAGGACAAGAGGGAGCCCCT
GTTGGCCAAATCGAAGGAGGAGCGACAGAAGATGATTATGTGGCACTTGA
AAGGTAAAGAACATGGTGCAAGTACACGTTTTCAAACAGAAAACCGCATT
TGTGTTGCAAGCTTTCTAGACCAT

BO35129.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:39:54
Subject Length Description Subject Range Query Range Score Percent Strand
dia-RC 393 CG1768-PC 1..390 17..406 1950 100 Plus
dia-RD 3297 CG1768-PD 1..342 17..358 1710 100 Plus
dia-RE 3276 CG1768-PE 1..321 38..358 1605 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:55
Subject Length Description Subject Range Query Range Score Percent Strand
dia-RC 1775 CG1768-RC 135..528 13..406 1955 99.7 Plus
dia-RD 3797 CG1768-RD 135..480 13..358 1715 99.7 Plus
dia-RE 5260 CG1768-RE 520..842 36..358 1615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20760524..20760894 36..406 1855 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:39:53 has no hits.

BO35129.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:12 Download gff for BO35129.complete
Subject Subject Range Query Range Percent Splice Strand
dia-RC 139..528 17..408 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:19:45 Download gff for BO35129.complete
Subject Subject Range Query Range Percent Splice Strand
dia-RC 139..528 17..408 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:19:45 Download gff for BO35129.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20760525..20760894 37..408 99   Plus
2L 20760438..20760457 17..36 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:12 Download gff for BO35129.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20760525..20760894 37..408 99   Plus
arm_2L 20760438..20760457 17..36 100 -> Plus

BO35129.pep Sequence

Translation from 16 to 424

> BO35129.pep
MRLKKLGMSRHEKTKSTGGGLLDSLFGRPSKSKGGTISSGTLAHGGRPVS
ADNYVVPGVEDFEQYIQQLSVAELDAKFLEIIEDMNIPKDKREPLLAKSK
EERQKMIMWHLKGKEHGASTRFQTENRICVASFLDH

BO35129.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:48
Subject Length Description Subject Range Query Range Score Percent Strand
dia-PC 130 CG1768-PC 1..130 1..130 670 100 Plus
dia-PD 1098 CG1768-PD 1..126 1..123 594 93.7 Plus
dia-PE 1091 CG1768-PE 1..119 8..123 560 93.3 Plus
dia-PB 1091 CG1768-PB 1..119 8..123 560 93.3 Plus
dia-PA 1091 CG1768-PA 1..119 8..123 560 93.3 Plus