BO35134.complete Sequence
1537 bp assembled on 2013-12-04
GenBank Submission: KX798665
> BO35134.complete
GAAGTTATCAGTCGACATGTTGTGCGAAGGAGTGATGCTGCCCCACAGCT
TGGGCGTGGGCGGTGGGTTTGTTGCTACCATTTATTCCAGAGAAACAGAA
TTTAGTGAGGTTCTAATTGCCCGAGAAACCGCTCCAGCTGCGGCCACTCA
GGACATGTTCGTCAAAACAGAAATCACCGGCGCATTATCCTGTGCCGTTC
CCGCCGAAATTTATGGCTACTCCGAGTTGCACGATAAGTATGGCCGCCTG
CCCTGGAAAACGCTTTTCCAGCCCACAATTGATCTCTGCCGCCGTGGCAT
CCTGGTCTCCAGGTATCTCTCCGGAGTCCTTCAACGCGAAGAAGAGCGTA
TCAGAAACGAACCCTCCATGGCCGAGATCTTTATTAATCCGAAAACGGAT
GAGGTCTATAAGCAGGGCGAGGTCATGTACCGTCACACTTTGGCCGAAAC
TCTGGAAATCATAGCTGATGAGGGCGCCAAAGCTATTTATGGAGGGGGCA
GGGTAGGCAGAAAACTGGTGGAGGATATCCAGGCAATGGGCGGCATTGTT
ACCGAAGAGGATCTGCAAAGTTACAATGTTCGATGGGAAATGCCGCTCCA
CTCCCACTTTAGTGGTGGCTACAAATTAATCACCTCGACACTGCCCACGA
GTGGGGCCGTGTTAACCTTTATGCTGAATGTAATGGAACCGCTATATACG
AGCAATACGGACAAGTACTGGCAGCGGTTAATTGAGACTTTTAAGCACGC
ATACGGGCATCGTACCAATTTGGGCGACATCCACTATGAACCAGATGTGC
AGGAGATGTACGAAAACCTTATCGATCCGGCCTTTGCCGCAGAGATCCGA
AAACTTATTTTAGACGACAGGACCTTCGAGGACATGTCGTACTACGGAGC
CAATTTTGCTAATGAGGAGGATCATGGTACAGCACACATATCCGTTTTGG
CGCCAAATGGTGATGCCATTTCAGTGACCAGTACAATAAACAGCCATTTG
GGAGCCAAAGTGAGATCCCGGCAAACAGGCTTTATCCTCAACGACGAAAT
GGACGACTTTAGTACGCCCGGAAAAATAAATGCCTATGGCATACCCGCCA
GTCCCGCAAACTTTATCAAACCAGGAAAACGGCCGATGTCCTCAACTTGT
CCCAGCATCGTTTTAGACACCCATGGGAATGTTAAATTGATTGTGGGTGG
TGCCGGTGGGTCAAAAATCACCACCTCTGTTGCCCAGACTATTCTAAGGT
ATTTTGTACTCCACGAACCTATTGAGAAGGCGGTGAATTCAGGACGTTTG
CATCACCAACTGGCGCCAATGCACATTGACATGGAACCAAATGTTCCTAG
GCATACTGTCGCCTATTTAAGTGCTATTGGACACGACATCAGATTTCTGG
AAGATGATAAGGCATATTCAGCACAGACGGCCATTGGAATCTTGGGCACT
GAACCACACCCCGTCTGCGATCGGAGAAGAGTGGGTAGCGCGGTGGTAGT
CGAACCAGATAGAGTAGAAGCAAGCTTTCTAGACCAT
BO35134.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:39:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17636-RA | 1716 | CG17636-PA | 210..1713 | 16..1519 | 7520 | 100 | Plus |
| CG17636-RC | 1758 | CG17636-PC | 252..1755 | 16..1519 | 7520 | 100 | Plus |
| CG17636-RB | 1506 | CG17636-PB | 1..1503 | 17..1519 | 7515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17636-RA | 1894 | CG17636-RA | 294..1797 | 16..1519 | 7520 | 100 | Plus |
| CG17636-RC | 2028 | CG17636-RC | 428..1931 | 16..1519 | 7520 | 100 | Plus |
| CG17636-RB | 2036 | CG17636-RB | 436..1939 | 16..1519 | 7520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 124467..125409 | 1519..577 | 4715 | 100 | Minus |
| X | 23542271 | X | 125495..126055 | 576..16 | 2805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:39:35 has no hits.
BO35134.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:06 Download gff for
BO35134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17636-RB | 442..1939 | 22..1521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:19:37 Download gff for
BO35134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17636-RB | 442..1939 | 22..1521 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:19:37 Download gff for
BO35134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 124465..125409 | 577..1521 | 99 | <- | Minus |
| X | 125495..126049 | 22..576 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:06 Download gff for
BO35134.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20852..21796 | 577..1521 | 99 | <- | Minus |
| arm_X | 21882..22436 | 22..576 | 100 | | Minus |
BO35134.pep Sequence
Translation from 16 to 1537
> BO35134.pep
MLCEGVMLPHSLGVGGGFVATIYSRETEFSEVLIARETAPAAATQDMFVK
TEITGALSCAVPAEIYGYSELHDKYGRLPWKTLFQPTIDLCRRGILVSRY
LSGVLQREEERIRNEPSMAEIFINPKTDEVYKQGEVMYRHTLAETLEIIA
DEGAKAIYGGGRVGRKLVEDIQAMGGIVTEEDLQSYNVRWEMPLHSHFSG
GYKLITSTLPTSGAVLTFMLNVMEPLYTSNTDKYWQRLIETFKHAYGHRT
NLGDIHYEPDVQEMYENLIDPAFAAEIRKLILDDRTFEDMSYYGANFANE
EDHGTAHISVLAPNGDAISVTSTINSHLGAKVRSRQTGFILNDEMDDFST
PGKINAYGIPASPANFIKPGKRPMSSTCPSIVLDTHGNVKLIVGGAGGSK
ITTSVAQTILRYFVLHEPIEKAVNSGRLHHQLAPMHIDMEPNVPRHTVAY
LSAIGHDIRFLEDDKAYSAQTAIGILGTEPHPVCDRRRVGSAVVVEPDRV
EASFLDH
BO35134.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17636-PA | 571 | CG17636-PA | 71..571 | 1..501 | 2614 | 100 | Plus |
| CG17636-PC | 585 | CG17636-PC | 85..585 | 1..501 | 2614 | 100 | Plus |
| CG17636-PB | 501 | CG17636-PB | 1..501 | 1..501 | 2614 | 100 | Plus |
| Ggt-1-PB | 579 | CG6461-PB | 72..571 | 1..495 | 1426 | 55.2 | Plus |
| Ggt-1-PA | 579 | CG6461-PA | 72..571 | 1..495 | 1426 | 55.2 | Plus |
