Clone BO35136 Report

Search the DGRC for BO35136

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:36
Vector:pDNR-Dual
Associated Gene/TranscriptJon66Cii-RA
Protein status:BO35136.pep: Imported from assembly
Sequenced Size:820

Clone Sequence Records

BO35136.complete Sequence

820 bp assembled on 2013-12-04

GenBank Submission: KX799944

> BO35136.complete
GAAGTTATCAGTCGACATGAAAGCATTCATAGCTATCCTGGCTTTGGCTG
TGGCCTCGGCCTCTGGCGCCACCATGCCCCGTTTGGCCACCGAGAAACTG
ACCCCGGTCCACACCAAGGACATGCAGGGTCGCATCACCAACGGCTATCC
GGCTGAGGAGGGCAAGGCTCCCTACACCGTCGGTCTGGGCTTCAGCGGCG
GCTGGTGGTGCGGTGGTTCGATCATCGCACACGATTGGGTGCTCACCGCC
GAGCACTGCATCGGAGATGCTGACTCCGTAACTGTCTACTTCGGAGCCAC
CTGGCGCACCAACGCCCAGTTCACCCACTGGGTTGGCAACGGTAACTTTA
TCAAGCACTCATCCGCCGATATTGCCCTCATCCGCATTCCCCACGTGGAC
TTCTGGCACATGGTGAACAAGGTGGAGCTGCCCAGCTACAACGATCGCTA
CAACGACTACAACGAATGGTGGGCTGTTGCCTGCGGCTGGGGAGGCACCT
ATGACGGCAGCCCACTGCCCGACTACCTGCAGTGTGTCGATCTCCAGATC
ATCCACAACTCCGAGTGCTCCGGATACTATGGAAGCGTGGGAGACAACAT
CCTCTGTGTCAGGACTCCCGACGGCAAGTCCACCTGCGGTGGTGACTCCG
GCGGCCCCCTGGTCACCCATGACGGTACCAAGCTTGTGGGGGTCACCAAC
TTTGGTTCCGTCGCCGGCTGCCAGTCGGGTGCTCCCGCTGGATTCCAGCG
TGTCACCTACCACCTGGACTGGATTCGCGACCATACCGGCATTGCTTACT
ACGCAAGCTTTCTAGACCAT

BO35136.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:39:41
Subject Length Description Subject Range Query Range Score Percent Strand
Jon66Cii-RA 789 CG7170-PA 1..786 17..802 3930 100 Plus
Jon66Ci-RA 783 CG7118-PA 101..780 126..802 2145 88.3 Plus
Jon25Biii-RA 777 CG8871-PA 101..776 126..801 1730 83.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:39:42
Subject Length Description Subject Range Query Range Score Percent Strand
Jon66Cii-RA 830 CG7170-RA 2..789 15..802 3940 100 Plus
Jon66Ci-RA 838 CG7118-RA 119..798 126..802 2145 88.3 Plus
Jon25Biii-RA 827 CG8871-RA 120..795 126..801 1730 83.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:39:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8392861..8393648 802..15 3940 100 Minus
3L 28110227 3L 8391658..8392337 126..802 2145 88.3 Plus
2L 23513712 2L 4949973..4950648 801..126 1730 83.7 Minus
3R 32079331 3R 30487110..30487524 792..375 540 75.8 Minus
3R 32079331 3R 30489367..30489781 375..792 510 75.4 Plus
3R 32079331 3R 29923787..29924214 805..375 500 74.9 Minus
3R 32079331 3R 29922615..29923042 375..805 485 74.7 Plus
2L 23513712 2L 4954326..4954758 802..367 430 74.3 Minus
2L 23513712 2L 4954815..4955009 328..140 400 81.5 Minus
2R 25286936 2R 8691843..8691968 367..492 315 83.3 Plus
3L 28110227 3L 6053938..6054145 492..285 290 76 Minus
3R 32079331 3R 29924350..29924523 260..93 280 78.7 Minus
3L 28110227 3L 6052750..6052857 367..474 270 83.3 Plus
3R 32079331 3R 29922306..29922479 93..260 265 78.2 Plus
2L 23513712 2L 4952294..4952469 792..617 250 76.1 Minus
2L 23513712 2L 4952785..4952996 328..126 245 75.5 Minus
3R 32079331 3R 30489090..30489231 125..260 225 78.9 Plus
Blast to na_te.dros performed on 2014-11-28 14:39:40 has no hits.

BO35136.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:08 Download gff for BO35136.complete
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 4..789 17..804 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:19:39 Download gff for BO35136.complete
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 4..789 17..804 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:19:39 Download gff for BO35136.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8392859..8393646 17..804 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:08 Download gff for BO35136.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8385959..8386746 17..804 99   Minus

BO35136.pep Sequence

Translation from 16 to 820

> BO35136.pep
MKAFIAILALAVASASGATMPRLATEKLTPVHTKDMQGRITNGYPAEEGK
APYTVGLGFSGGWWCGGSIIAHDWVLTAEHCIGDADSVTVYFGATWRTNA
QFTHWVGNGNFIKHSSADIALIRIPHVDFWHMVNKVELPSYNDRYNDYNE
WWAVACGWGGTYDGSPLPDYLQCVDLQIIHNSECSGYYGSVGDNILCVRT
PDGKSTCGGDSGGPLVTHDGTKLVGVTNFGSVAGCQSGAPAGFQRVTYHL
DWIRDHTGIAYYASFLDH

BO35136.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
Jon66Cii-PA 262 CG7170-PA 1..262 1..262 1464 100 Plus
Jon66Ci-PA 260 CG7118-PA 1..260 1..262 1198 82.2 Plus
Jon25Biii-PA 258 CG8871-PA 1..258 1..261 1192 83.5 Plus
Jon99Ciii-PB 265 CG31362-PB 1..265 1..261 926 65.6 Plus
Jon99Ciii-PA 265 CG31362-PA 1..265 1..261 926 65.6 Plus