BO35139.complete Sequence
352 bp assembled on 2013-12-04
GenBank Submission: KX799591
> BO35139.complete
GAAGTTATCAGTCGACATGAGTTCCAAGTCCCTTTTCGACAGCGAGGAGG
ATGCCGCTCAGGCCAACAAATTATCCAGGAAAGCAAAGGAATCGCCCTTC
ATGCTTGTGGGTGAGTTTTGCCAATTTCCGGACAGCGAAAGTTTTGCCGC
CGTGACGTCACATGGAAACTTTTGGCTCAGCAGCCAGCTAGATACGCACA
TATCTACACACATTTACGAATGTACATTGCGTGTGCGGCGGGGAAGTCGG
CTAATCTTGACCTTGGCCATGAGTTTAACGTCAATTTGGGGTCACTTTTT
GATGTCACTGTGTGACATAACGGTGAATGCAGTAGCAAGCTTTCTAGACC
AT
BO35139.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:40:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17734-RC | 321 | CG17734-PC | 1..318 | 17..334 | 1590 | 100 | Plus |
CG17734-RB | 288 | CG17734-PB | 1..96 | 17..112 | 480 | 100 | Plus |
CG17734-RA | 306 | CG17734-PA | 1..96 | 17..112 | 480 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:40:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17734-RC | 1317 | CG17734-RC | 125..442 | 17..334 | 1590 | 100 | Plus |
CG17734-RB | 1024 | CG17734-RB | 125..220 | 17..112 | 480 | 100 | Plus |
CG17734-RA | 764 | CG17734-RA | 125..220 | 17..112 | 480 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:40:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11243558..11243875 | 334..17 | 1590 | 100 | Minus |
2R | 25286936 | 2R | 10420908..10421003 | 112..17 | 210 | 81.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:40:16 has no hits.
BO35139.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:22 Download gff for
BO35139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17734-RC | 125..442 | 17..336 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:19:54 Download gff for
BO35139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17734-RC | 125..442 | 17..336 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:19:54 Download gff for
BO35139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11243555..11243875 | 17..336 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:22 Download gff for
BO35139.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7069277..7069597 | 17..336 | 99 | | Minus |
BO35139.pep Sequence
Translation from 16 to 352
> BO35139.pep
MSSKSLFDSEEDAAQANKLSRKAKESPFMLVGEFCQFPDSESFAAVTSHG
NFWLSSQLDTHISTHIYECTLRVRRGSRLILTLAMSLTSIWGHFLMSLCD
ITVNAVASFLDH
BO35139.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:48:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17734-PC | 106 | CG17734-PC | 1..106 | 1..106 | 545 | 100 | Plus |
CG17734-PB | 95 | CG17734-PB | 1..32 | 1..32 | 154 | 100 | Plus |
CG17734-PA | 101 | CG17734-PA | 1..32 | 1..32 | 154 | 100 | Plus |