BO35145.complete Sequence
1927 bp assembled on 2014-03-03
GenBank Submission: KX796574
> BO35145.complete
GAAGTTATCAGTCGACATGGCCAACAACAACTACGCCGGGTTTAACTACG
GCGGCACCCAGTACAATACGGGCCAAGTCTCGTACCCGGCGGTAACCAAT
GCCACCTACGCGAATGCGGCCGCCTATCAGAATGCCGCTGTGGCCGCCGG
ACAGGGTGGTTATGGCGGAGCAGCAGGAGCGGGCGCTGGCGCCACCTCTG
GCCCTGGGGCGGGGGGTTATGGTGGCTACGGCGACTATCGAAGTGCCATG
CAATACGACGCCACCAAGACATTCTATCAGCAGTCGCCGGCCAGCTACAA
CGCCTCCGGTTCGACAGCCTCGGTCAGCAAGACGCACTACTCGGCTCCGC
CAGTCAAGAATCAGGTCAAGGGCAAGATGGACAAGTCGAACGGTGGTCCC
AAGCCCCCTAGTTCGGCTCCTCCGGCGGGCAACAATTACAGTGGCTATGA
TACAGCACTCTACAATGCGGCAAGCATGTATGTGGCCCAACAGCATCAGG
GCAATCCAAACCAAAAACCAAATGGCGGCGCCAATAACTGGTATCAGCGT
AAGATGGGAGCCACCATACCAGGAGCAACGGCCATAAGGGGTATGCGTCC
GAAGGCACCTCCACGTCCCCAGCAGCTGCACTACTGCGAAGTGTGCAAAA
TCTCGTGCGCCGGGCCGCAGACTTATCGCGAGCATCTGGAGGGTCAGAAG
CATAAGAAACGCGAGGCTTCGCTGAAGATGTCCGCTAGTGCCAACAGTGC
TACACAAAATCGTGGTAACAACTACCACTGCGAGCTGTGCGATGTAACAT
GCACTGGTACGGACGCATATGCCGCCCATGTACGCGGAGCCAAGCATCAG
AAGGTGGTCAAGTTGCACCAGAAACTGGGCAAACCCATTCCCTCGGAGGA
GCCCAAAAAGATGGGCAAGATCAACTTTGTGCCCGCTGCTGCTGGCGGAG
CTGGTGTTGCCAAGACCGAAGGTGGCGCGAACGAGAGCGATGCAGCTGGA
GATCTCGATGATAATCTGGACGATTCGCTGGGCGAAAACACGGACAACAT
TAAGCCAGTAGGCGGCGAGTATATTGAAGAGGTCAAGGACGAAGAGGGCA
AGATTTTGAGCTTTAATTGCAAGCTGTGCGATTGTAAGTTCAACGACCCG
AATGCCAAAGAGATGCATATGAAGGGCCGTCGCCATCGCTTGCAGTACAA
GCGAAAGGTGCAGCCAGATCTAGTTGTCGACTTCAAGCCCACTCCTCGCC
AGCGCCGCCTGGCTGAGGCCCGTGCCAACCGGGCCATGATGTCCTCGCAT
CGCGGCGGTGATGATCACGACGGCGGCTACTGGGAGGAGCAGCGCAACCG
ACAATACAACGAAGAGTATGACTACAACAACTGGATGTCGCGCAGTTTCG
GAGGTGCCCAGCGCTTTGGGCGCATGGGCAATGGACCGCCGCCGCACTTT
GGCATGATGCCCGGCGGAAATGTTCGTCGTCCGGAAAGCACCGATGATCG
CCACGCCATTGCCCGTCACGCCGAGATCTATCCGAAGGAGGAGGAGCTGC
AGACCATCCAGCGCATCGTCTCGCACACCGAGAGGGCCCTAAAATTGGTC
TCCGATGCCCTGGCCGAGCAGCCCAGCGATGCCGGAGCGGCCAATAAGAA
GGACAAGGCTGAAAAGCCGTCGGAGAAAGACGGACGCGACAATCAGATCT
TCTCGTTCCAAAAAGACGCCGACAATGGTGGCAATGTCGTGCGCATCCTG
AAGGGAGTGATGCGAGTGGGCTACCTGGCCAAGGGGCTGCTGCTCCACGG
CGACAACGCCGTCGAGCTGGTCGTCCTTTGCGCGGAGAAGCCGACTTCGG
GTCTTTTGCAGCGTGTGGCCAATGTGCTGCCCGACAAACTCAAGGAGGTG
GCAGGTAAGGCAAGCTTTCTAGACCAT
BO35145.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:01:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zn72D-RE | 1896 | CG5215-PE | 1..1893 | 17..1909 | 9465 | 100 | Plus |
| Zn72D-RD | 2655 | CG5215-PD | 1..1889 | 17..1905 | 9445 | 100 | Plus |
| Zn72D-RC | 2655 | CG5215-PC | 1..1889 | 17..1905 | 9445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:01:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zn72D-RE | 5042 | CG5215-RE | 193..2085 | 17..1909 | 9465 | 100 | Plus |
| Zn72D-RD | 3240 | CG5215-RD | 226..2114 | 17..1905 | 9445 | 100 | Plus |
| Zn72D-RC | 3106 | CG5215-RC | 92..1980 | 17..1905 | 9445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:01:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16110480..16111869 | 1406..17 | 6950 | 100 | Minus |
| 3L | 28110227 | 3L | 16109617..16110124 | 1909..1402 | 2540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:01:07 has no hits.
BO35145.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:41 Download gff for
BO35145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zn72D-RE | 193..2085 | 17..1911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:29:23 Download gff for
BO35145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zn72D-RE | 193..2085 | 17..1911 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:29:23 Download gff for
BO35145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16109614..16110122 | 1404..1911 | 99 | <- | Minus |
| 3L | 16110483..16111869 | 17..1403 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:41 Download gff for
BO35145.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16102714..16103222 | 1404..1911 | 99 | <- | Minus |
| arm_3L | 16103583..16104969 | 17..1403 | 100 | | Minus |
BO35145.pep Sequence
Translation from 16 to 1927
> BO35145.pep
MANNNYAGFNYGGTQYNTGQVSYPAVTNATYANAAAYQNAAVAAGQGGYG
GAAGAGAGATSGPGAGGYGGYGDYRSAMQYDATKTFYQQSPASYNASGST
ASVSKTHYSAPPVKNQVKGKMDKSNGGPKPPSSAPPAGNNYSGYDTALYN
AASMYVAQQHQGNPNQKPNGGANNWYQRKMGATIPGATAIRGMRPKAPPR
PQQLHYCEVCKISCAGPQTYREHLEGQKHKKREASLKMSASANSATQNRG
NNYHCELCDVTCTGTDAYAAHVRGAKHQKVVKLHQKLGKPIPSEEPKKMG
KINFVPAAAGGAGVAKTEGGANESDAAGDLDDNLDDSLGENTDNIKPVGG
EYIEEVKDEEGKILSFNCKLCDCKFNDPNAKEMHMKGRRHRLQYKRKVQP
DLVVDFKPTPRQRRLAEARANRAMMSSHRGGDDHDGGYWEEQRNRQYNEE
YDYNNWMSRSFGGAQRFGRMGNGPPPHFGMMPGGNVRRPESTDDRHAIAR
HAEIYPKEEELQTIQRIVSHTERALKLVSDALAEQPSDAGAANKKDKAEK
PSEKDGRDNQIFSFQKDADNGGNVVRILKGVMRVGYLAKGLLLHGDNAVE
LVVLCAEKPTSGLLQRVANVLPDKLKEVAGKASFLDH
BO35145.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:00:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zn72D-PE | 631 | CG5215-PE | 1..631 | 1..631 | 3377 | 100 | Plus |
| Zn72D-PD | 884 | CG5215-PD | 1..630 | 1..630 | 3372 | 100 | Plus |
| Zn72D-PC | 884 | CG5215-PC | 1..630 | 1..630 | 3372 | 100 | Plus |
| Zn72D-PF | 884 | CG5215-PF | 1..630 | 1..630 | 3372 | 100 | Plus |
| Zn72D-PB | 884 | CG5215-PB | 1..630 | 1..630 | 3372 | 100 | Plus |
