Clone BO35146 Report

Search the DGRC for BO35146

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptDeaf1-RC
Protein status:BO35146.pep: Imported from assembly
Sequenced Size:1651

Clone Sequence Records

BO35146.complete Sequence

1651 bp assembled on 2014-03-03

GenBank Submission: KX799362

> BO35146.complete
GAAGTTATCAGTCGACATGTGCGCTATGGTAATGCAGTTGGACACCAAGG
TTCGCATGGTCACATCCTCCTCCAACGACAACAGTGGTAGCGGCGGCGCC
AGTGGCGGTACAAGCGGAGCGGGCGGAGGAAACGGCGGTGGCGGTGTGGT
TTCGGTGCCCGTATCCCTGCCCATCGGTTCGATGATAACCGGCACTACCT
TCAATGTGATCACGCCCGACCAGCTGCCCCCTCACTTCAAGCCGATGCTG
TGCGTCGACAACAATGGCTACCTGTCCGGCAGCACGGTCAGCATGGGCAA
CGACCTCAAGACGATCGTCATCCAGCAACAGCAGACGCAACCAGGCGGCG
GCGGTGGCGGCGCCAATAATGCGGGCACCAATACGACCGCCACAAATACG
ATTGGACTGAATCACGATGGCTCCGGGAGCAACAATAGCCACGACAGCCT
GGCCACCTTGGAGCACGCCGCGGGCGGAGCGAGTGGCGTCGGCGGTGGCG
GCGGCGGAACGGGTGGTGGCTCCTCGGGATGGTCGGAGAACCCGTCAACC
CAGCACAATGAGGTCTTCCAGATCCGCTGCAAAACCACCTGCGCCGAGTT
ATACCGCAGCAAGCTGGGCTCCGGCGGCCGTGGACGCTGTGTGAAGTACA
AGGACAAGTGGCATACGCCCAGTGAGTTTGAGCATGTGTGTGGCCGGGGC
TCCAGCAAGGATTGGAAGCGTTCGATCAAGTACGGCGGCAAATCGCTGCA
GTCCCTCATCGATGAGGGTACGCTCACGCCGCACGCGACCAACTGCAGCT
GCACCGTCTGCTGCGACGACGAAGCAGGTGAGTCAGCTTCCGGCCCTGTC
CGTCTCTTTACACCGTACAAGCGGCGGAAGCGGAATCAAACTGATCTCGA
TATGGAGTCTGGACCCAAACGCAAGCGTAACACCCATCATAGTAACAACA
ACAACAGTAACACCAATAACAACAACACGAGCGGGAGCGGCGCCAACAAC
TGTGTGGATGTAACTGCAGCTGTGGCTGCTGCAACAGCCAGCGTGGTGGA
CGAGAACAACATGTTCCTGTCGGAAGAGAACATCACGTCCAAGGATGAGC
CGTGGGCAGCGCTCAACGACAGCCTGGACACCTCCACCGAGCTGGTCGAT
CAGTCGCAGATGGGCAACACGTACGAACGGGAAACGTTTGTGGTGAACAT
CAACGATGGATCCTCCATCGCCGTCCTGGACACCAGCCAGTCGATGAAGA
ACATCGAGCACGTGTACTGCACCATGGTCAAGGCCACCAATGACTTCAAA
CGCATGCTTAACGACATGAAGCAGTCCTTCGAGCGTCGCATCGAGGTTCT
GCAAAAGGAGCGCGATGCAGCGGTCAGCGCGATGCGTGTCCAAGTGCACG
CGGACATCGATGATCCAAATATTTCAGGCTCCCTGCACGGCAACGAGATC
ATTTCGGCTAAGAAGTGCGCCAACTGTAACCGCGAAGCATTGGCCGAGTG
CTCACTGTGCCGAAAGACGCCGTACTGCTCGGAGTTCTGCCAGCGGAAGG
ATTGGAATGCTCACCAGGTGGAGTGCACAAGGAATCCACAAACGACAACG
CAGCAGGTCATGCTGTTGATCGACGATCAGTCCGCAAGCTTTCTAGACCA
T

BO35146.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:01:02
Subject Length Description Subject Range Query Range Score Percent Strand
Deaf1-RC 1620 CG8567-PC 1..1617 17..1633 8085 100 Plus
Deaf1-RD 1731 CG8567-PD 130..1728 35..1633 7995 100 Plus
Deaf1-RA 1731 CG8567-PA 130..1728 35..1633 7995 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:01:05
Subject Length Description Subject Range Query Range Score Percent Strand
Deaf1-RC 2042 CG8567-RC 90..1706 17..1633 8085 100 Plus
Deaf1-RD 3588 CG8567-RD 491..2089 35..1633 7995 100 Plus
Deaf1-RA 2425 CG8567-RA 491..2089 35..1633 7995 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:01:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19819191..19820010 17..836 4100 100 Plus
3L 28110227 3L 19828315..19828945 835..1465 3155 100 Plus
3L 28110227 3L 19829018..19829187 1464..1633 850 100 Plus
Blast to na_te.dros performed on 2014-11-28 15:01:02 has no hits.

BO35146.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:39 Download gff for BO35146.complete
Subject Subject Range Query Range Percent Splice Strand
Deaf1-RC 90..1706 17..1635 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:29:21 Download gff for BO35146.complete
Subject Subject Range Query Range Percent Splice Strand
Deaf1-RC 90..1706 17..1635 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:29:21 Download gff for BO35146.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19819191..19820010 17..836 100 -> Plus
3L 19828317..19828945 837..1465 100 -> Plus
3L 19829020..19829187 1466..1635 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:39 Download gff for BO35146.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19812291..19813110 17..836 100 -> Plus
arm_3L 19821417..19822045 837..1465 100 -> Plus
arm_3L 19822120..19822287 1466..1635 98   Plus

BO35146.pep Sequence

Translation from 16 to 1651

> BO35146.pep
MCAMVMQLDTKVRMVTSSSNDNSGSGGASGGTSGAGGGNGGGGVVSVPVS
LPIGSMITGTTFNVITPDQLPPHFKPMLCVDNNGYLSGSTVSMGNDLKTI
VIQQQQTQPGGGGGGANNAGTNTTATNTIGLNHDGSGSNNSHDSLATLEH
AAGGASGVGGGGGGTGGGSSGWSENPSTQHNEVFQIRCKTTCAELYRSKL
GSGGRGRCVKYKDKWHTPSEFEHVCGRGSSKDWKRSIKYGGKSLQSLIDE
GTLTPHATNCSCTVCCDDEAGESASGPVRLFTPYKRRKRNQTDLDMESGP
KRKRNTHHSNNNNSNTNNNNTSGSGANNCVDVTAAVAAATASVVDENNMF
LSEENITSKDEPWAALNDSLDTSTELVDQSQMGNTYERETFVVNINDGSS
IAVLDTSQSMKNIEHVYCTMVKATNDFKRMLNDMKQSFERRIEVLQKERD
AAVSAMRVQVHADIDDPNISGSLHGNEIISAKKCANCNREALAECSLCRK
TPYCSEFCQRKDWNAHQVECTRNPQTTTQQVMLLIDDQSASFLDH

BO35146.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
Deaf1-PC 539 CG8567-PC 1..539 1..539 2868 100 Plus
Deaf1-PE 536 CG8567-PE 1..536 1..539 2839 99.4 Plus
Deaf1-PD 576 CG8567-PD 44..576 7..539 2836 100 Plus
Deaf1-PA 576 CG8567-PA 44..576 7..539 2836 100 Plus
Deaf1-PB 573 CG8567-PB 44..573 7..539 2807 99.4 Plus