Clone BO35149 Report

Search the DGRC for BO35149

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG43668-RA
Protein status:BO35149.pep: Imported from assembly
Sequenced Size:574

Clone Sequence Records

BO35149.complete Sequence

574 bp assembled on 2013-12-04

GenBank Submission: KX794047

> BO35149.complete
GAAGTTATCAGTCGACATGTTAGCCACTTTGATTGGTCTTGCTCTGCTGC
TCCAAGCTAACACGATTGCAGGACAGGATTACCAAGTTTTTGGATCACCT
GGCGTACAAGTAATCTACCCGTCCTCATCGCAAGTTCAGGTCATTGGCGG
AAGACATTTCTTACGCAACGGATTGCGAAGGAATCTCACGATCAATGCGA
ACGCAACTAGTCAAAATTTTCAACTTATCAGTAGCTTGAGCAACGGAAAT
TCAGGCAACACTCCTCTTCGGAATTTCTTAAGGTCCTTGTTTGGCCGCCA
GCCAAATATCCAGTATGTAAACCTGAATTCCAGAGCCTTTAACGACGTCT
CCCAGGAGCCTCTATACTGGAATCCATATCGGTCCTTTGCGAGTCCAGTG
GTTTTGCCCCGCGCACGAGTTAAGACTGTAAGACAAGGTGTTCCACGACG
GATTTTGGTACGGAATCTGATGTCCACCAAATCCCAGACCACCAATGTGC
AATCCTTTAGGATTCCGATTCTTGAGAACGAATGGCAGTATGACCCGACA
TATGTAGCAAGCTTTCTAGACCAT

BO35149.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG43668-RA 543 CG43668-PA 1..540 17..556 2700 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG43668-RA 676 CG43668-RA 54..594 16..556 2705 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:40:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20791617..20792139 538..16 2615 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:40:59 has no hits.

BO35149.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:38 Download gff for BO35149.complete
Subject Subject Range Query Range Percent Splice Strand
CG43668-RA 60..594 22..558 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:10 Download gff for BO35149.complete
Subject Subject Range Query Range Percent Splice Strand
CG43668-RA 60..594 22..558 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:10 Download gff for BO35149.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20791617..20792133 22..538 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:38 Download gff for BO35149.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16679122..16679638 22..538 100   Minus

BO35149.pep Sequence

Translation from 16 to 574

> BO35149.pep
MLATLIGLALLLQANTIAGQDYQVFGSPGVQVIYPSSSQVQVIGGRHFLR
NGLRRNLTINANATSQNFQLISSLSNGNSGNTPLRNFLRSLFGRQPNIQY
VNLNSRAFNDVSQEPLYWNPYRSFASPVVLPRARVKTVRQGVPRRILVRN
LMSTKSQTTNVQSFRIPILENEWQYDPTYVASFLDH

BO35149.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG43668-PA 180 CG43668-PA 1..180 1..180 920 100 Plus