Clone BO35150 Report

Search the DGRC for BO35150

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptMf-RK
Protein status:BO35150.pep: Imported from assembly
Sequenced Size:391

Clone Sequence Records

BO35150.complete Sequence

391 bp assembled on 2013-12-04

GenBank Submission: KX795072

> BO35150.complete
GAAGTTATCAGTCGACATGTTCAAAAACCACTTGGAAATGATTGGGCGCA
ATGAGAGCCCCAGCAAGAAGGCGAAATTCTGGCAGTCCTACATCAGGTCC
CTGAAGGGCTCCGAGGATATCCGTGCCCACGAGGCGCCCCGTGCCTCTCG
TCCCTACAGCTCCTACCTGGACTCGCCCTCCTACAGGAGCATCTATGACG
AGCCCGCCACCGCCAATGAGCGCGTCCAGTCCTCTGGCTACAGATATCTG
CCAGTGAGCCGCGACACCTACGGCTACTCGCCCCGTGCCATCTACGATCA
TCACTACAGCCGAACAAGTAAGTTGGTACCATATACGGACCACATACTGT
ACTATCTACAGCCGATTCCCGCCGCAAGCTTTCTAGACCAT

BO35150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:04
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RP 360 CG6803-PP 1..357 17..373 1785 100 Plus
Mf-RK 360 CG6803-PK 1..357 17..373 1785 100 Plus
Mf-RO 933 CG6803-PO 1..305 17..321 1510 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:06
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-RP 2827 CG6803-RP 85..441 17..373 1785 100 Plus
Mf-RK 2535 CG553-RK 85..441 17..373 1785 100 Plus
Mf-RO 1777 CG6803-RO 115..419 17..321 1510 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:02
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15178224..15178490 373..107 1335 100 Minus
3R 32079331 3R 15179038..15179129 108..17 460 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:41:03 has no hits.

BO35150.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:40 Download gff for BO35150.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RK 90..441 22..375 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:12 Download gff for BO35150.complete
Subject Subject Range Query Range Percent Splice Strand
Mf-RK 90..441 22..375 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:12 Download gff for BO35150.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15179039..15179124 22..107 100   Minus
3R 15178222..15178489 108..375 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:40 Download gff for BO35150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11004761..11004846 22..107 100   Minus
arm_3R 11003944..11004211 108..375 99 <- Minus

BO35150.pep Sequence

Translation from 16 to 391

> BO35150.pep
MFKNHLEMIGRNESPSKKAKFWQSYIRSLKGSEDIRAHEAPRASRPYSSY
LDSPSYRSIYDEPATANERVQSSGYRYLPVSRDTYGYSPRAIYDHHYSRT
SKLVPYTDHILYYLQPIPAASFLDH

BO35150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:11
Subject Length Description Subject Range Query Range Score Percent Strand
Mf-PP 119 CG6803-PP 1..119 1..119 637 100 Plus
Mf-PK 119 CG6803-PK 1..119 1..119 637 100 Plus
Mf-PN 157 CG6803-PN 1..108 1..110 543 93.6 Plus
Mf-PG 157 CG6803-PG 1..108 1..110 543 93.6 Plus
Mf-PA 157 CG6803-PA 1..108 1..110 543 93.6 Plus