BO35151.complete Sequence
1141 bp assembled on 2013-12-04
GenBank Submission: KX799000
> BO35151.complete
GAAGTTATCAGTCGACATGTGGTTACAGTGCGCGAGGAAACCAATACGTG
CAGACTTTTGGCTGCAGCTGCTCTGCGTGAGTTTTACACTCTTTCACCTG
GAATTCGCCGCGGCCCAAAATGCGGGAGTGGTGGCAGCTGCCGTGGCGGC
TGGACAAAACCAAACGCAGGTCTATGTGACGGATTCTTGCCTGCAAAAGC
CGTACCGCTGTCCTCATCCGAAGATCCAGTTCTATTTGTACACGAGACGC
ACCCAGGAGCAGCCGGAGTTCATAGATGTCCTGGATCCGAACGCCCTGTA
CTACACGCACTTCAATCCACGCCATCCCACCAAGATCATAATCCATGGAT
TCGGCGGCGGCAGGACTCTGAGTCCCAGTCCCGATCTGCGGGAGGCCTAC
TTCAGTGTGGGCGAGTACAACATCATCATAGTGGACTACGCGGATGCCGT
TAAGGAACCTTGTCTGAGTCAGATGGACTGGGCTCCTCGGTTCGGCAGCC
TGTGCATCTCCCAGCTGGTCAAATACCTCGCCCGACATCCTCGTGGCGTC
CAGCCGGACGACCTGCACTTCATTGGCTACAGTGTGGGTGCCCACATCGC
CGGTCTGGTGGCTAACTATTTGAAGCCGGAGGAGGGCAAGCTGGGCAGGA
TCACCGCGCTGGATCCCACGATATTCTTCTATGCCGGGGCCAACAACTCC
AGGGATCTGGATTCGACGGATGCACACTTCGTGGATGTTCTGCACACCGG
AGCTGGAATCCTGGGGCAGTGGCATTCCAGTGGTCATGCGGACTTCTATG
TCAACGGCGGCACGCGGCAACCAGCTTGTGTGGGTTCGGCAACCTTGTTT
CAAACGTTGGCTTGTGATCACACAAAAGTCACGCCGTACTTTATTGAATC
CATCACGACAACTCGCGGATTTTATGCGGGTCCTTGTCCCAACTTGTTCT
CCTATCTAATTGGTTGGTGTGAGCCCAAGGACTCGGAGTATGTGCTAATG
GGCGAACACTGTTCACACAAAGCTCGAGGGAATTATTATGTGACCACCAA
TGCCAAGGCGCCGTTTGCTCGCGGTTTTCCGGGAAAAGGACGATCGAATG
GGGAGTACCAGGGAGTACGGAGAGCAAGCTTTCTAGACCAT
BO35151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18641-RC | 1110 | CG18641-PC | 1..1107 | 17..1123 | 5535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18641-RC | 1790 | CG18641-RC | 421..1527 | 17..1123 | 5535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2411286..2412027 | 851..110 | 3710 | 100 | Minus |
| 2L | 23513712 | 2L | 2411052..2411220 | 1020..852 | 845 | 100 | Minus |
| 2L | 23513712 | 2L | 2410887..2410994 | 1123..1016 | 525 | 99.1 | Minus |
| 2L | 23513712 | 2L | 2414809..2414902 | 110..17 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:41:08 has no hits.
BO35151.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:42 Download gff for
BO35151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18641-RC | 421..1527 | 17..1125 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:13 Download gff for
BO35151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18641-RC | 421..1527 | 17..1125 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:13 Download gff for
BO35151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2410885..2410989 | 1021..1125 | 98 | <- | Minus |
| 2L | 2411052..2411220 | 852..1020 | 100 | <- | Minus |
| 2L | 2411286..2412026 | 111..851 | 100 | <- | Minus |
| 2L | 2414809..2414902 | 17..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:42 Download gff for
BO35151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2410885..2410989 | 1021..1125 | 98 | <- | Minus |
| arm_2L | 2411052..2411220 | 852..1020 | 100 | <- | Minus |
| arm_2L | 2411286..2412026 | 111..851 | 100 | <- | Minus |
| arm_2L | 2414809..2414902 | 17..110 | 100 | | Minus |
BO35151.pep Sequence
Translation from 16 to 1141
> BO35151.pep
MWLQCARKPIRADFWLQLLCVSFTLFHLEFAAAQNAGVVAAAVAAGQNQT
QVYVTDSCLQKPYRCPHPKIQFYLYTRRTQEQPEFIDVLDPNALYYTHFN
PRHPTKIIIHGFGGGRTLSPSPDLREAYFSVGEYNIIIVDYADAVKEPCL
SQMDWAPRFGSLCISQLVKYLARHPRGVQPDDLHFIGYSVGAHIAGLVAN
YLKPEEGKLGRITALDPTIFFYAGANNSRDLDSTDAHFVDVLHTGAGILG
QWHSSGHADFYVNGGTRQPACVGSATLFQTLACDHTKVTPYFIESITTTR
GFYAGPCPNLFSYLIGWCEPKDSEYVLMGEHCSHKARGNYYVTTNAKAPF
ARGFPGKGRSNGEYQGVRRASFLDH
BO35151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18641-PC | 369 | CG18641-PC | 1..369 | 1..369 | 2014 | 100 | Plus |
| CG14034-PC | 338 | CG14034-PC | 33..311 | 65..353 | 512 | 39.8 | Plus |
| CG14034-PB | 338 | CG14034-PB | 33..311 | 65..353 | 512 | 39.8 | Plus |
| CG13282-PB | 484 | CG13282-PB | 72..354 | 65..353 | 496 | 36.5 | Plus |
| CG13282-PA | 484 | CG13282-PA | 72..354 | 65..353 | 496 | 36.5 | Plus |
