Clone BO35152 Report

Search the DGRC for BO35152

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG17147-RB
Protein status:BO35152.pep: Imported from assembly
Sequenced Size:1045

Clone Sequence Records

BO35152.complete Sequence

1045 bp assembled on 2013-12-04

GenBank Submission: KX799854

> BO35152.complete
GAAGTTATCAGTCGACATGCTAAACCTCAAACTTGGAGTGCTTCTCGGAT
GCGTTCTCTTGTTGGCTACCGTAGCTCTTTCGGCGAGTGTCGGTGAATAC
GAGGAGCTGTGTCGCCTTTTCAAGAACGGGACCAAGGTTCGCAAGCCCGG
CACCTGCGACCAGTACATTCAGTGCTACGATGGCAACGGCACCGTCCTGA
CCTGCCCCTCCAACCAGTCCTTCAATCCCAGCAAGGGTAGTTGCGTGGAC
ACGTTGGCCAACAGCAACAAGTACTGCGGCAATCGCTGCGAGGGATTGGA
TGGCGAATGGGTGGCCGATCCGACCGAGTGCCACAAGTACTTCTACTGCA
TGAACGGCGTACCGCTGGCGGGGATGTGTCCCGTAGGCCAGCACTTCGAT
GAGCGCTCTCAGTCCTGCCTGTACGGCGTGGACTCCATGTGCGTGGATGT
GAACAACATTTGCGAGCTGGTGGCGGAAAATACGAAGTTCCGGAATGAGA
AGGACTGCGCCTACTACTATGAGTGTGACAAGACCGGTAACCATGCGTCC
AAGAGCTGCACTGTCACCTCCAAGAAGCGCGAGTATTTCGATGTGGAGAG
CGGCAATTGCGTGGAAGCCAATAAGGTGGAGTGCACCGCCCATTCGAAGG
AGAACGTCTGCACCAGCAGCACAACAATGACATTCAAATCCGACCAAGCC
ACCTGCCGTGGATACTTCGTATGCAAGGCCCTCTATCCCGTCGCCGACCT
GGATCCACTGTGGACGCAGTGCCCCGAGGGCTACTTCTTCGACGAGGATC
GGCAGCTCTGCGCCAATCCCACCACAGTGGTGTGCACCCACAACAGATGC
GACGGACGCGGCACGATGCTGGTGACCAGCAGCAGCAATAACTGTCACAA
CTACATCCGGTGTGTGGACAACAAGGAGGTGACGGAGGAAACCTGCCACT
GGGATCACTTCTTCGACGAGACAGTGGAAGCGTGCTCCTCCAAGATCATC
TACGATAAGTGTTGCGATGGCCGGGACGCAAGCTTTCTAGACCAT

BO35152.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG17147-RB 1014 CG17147-PB 1..1011 17..1027 5055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17147-RB 1136 CG17147-RB 91..1102 16..1027 5060 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20224287..20225290 24..1027 5020 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:41:13 has no hits.

BO35152.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:43 Download gff for BO35152.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RB 92..1102 17..1029 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:16 Download gff for BO35152.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RB 92..1102 17..1029 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:16 Download gff for BO35152.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20224279..20225290 17..1029 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:43 Download gff for BO35152.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20217379..20218390 17..1029 99   Plus

BO35152.pep Sequence

Translation from 16 to 1045

> BO35152.pep
MLNLKLGVLLGCVLLLATVALSASVGEYEELCRLFKNGTKVRKPGTCDQY
IQCYDGNGTVLTCPSNQSFNPSKGSCVDTLANSNKYCGNRCEGLDGEWVA
DPTECHKYFYCMNGVPLAGMCPVGQHFDERSQSCLYGVDSMCVDVNNICE
LVAENTKFRNEKDCAYYYECDKTGNHASKSCTVTSKKREYFDVESGNCVE
ANKVECTAHSKENVCTSSTTMTFKSDQATCRGYFVCKALYPVADLDPLWT
QCPEGYFFDEDRQLCANPTTVVCTHNRCDGRGTMLVTSSSNNCHNYIRCV
DNKEVTEETCHWDHFFDETVEACSSKIIYDKCCDGRDASFLDH

BO35152.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17147-PB 337 CG17147-PB 1..337 1..337 1894 100 Plus
CG17145-PB 334 CG17145-PB 3..332 5..332 556 35.9 Plus
CG17145-PA 334 CG17145-PA 3..332 5..332 556 35.9 Plus
CG5883-PA 339 CG5883-PA 1..337 1..332 510 34 Plus
CG6996-PC 364 CG6996-PC 28..337 31..339 342 28.7 Plus