BO35153.complete Sequence
2239 bp assembled on 2014-03-03
GenBank Submission: KX795925
> BO35153.complete
GAAGTTATCAGTCGACATGGAAAAGCACTGGAGATTGGTCTTGATCATCA
GCATCTGGATTTTAGTGGTGAATGCAGCCGTGAATGAGTCCACTTTGCGA
CGGCACCGCTACGAGTACGGATTTCTCAACGGCAGCCTGGAGTTGTCCCC
AGAAATTATCTCAACGGATATTCGGGGAAAAGAAGCAGCTGCCATCGAAT
CACCGCATGAACCCCATCTCACCAGGAGCTCCGTCATCTTCGGGCTTACC
AAAGTGGCCAACGAGAGCAATGTGACTCCCAGCTGCTACGCCCACTTGAA
GCAAGTGCAGCGGGGAATCCTCAGCAGGCAACCATGGGCCATGAAGGTTT
TAGATGCGTCGGGAACCAAGCCATCCGGCTTTGTGTTCGGCCAGAACTAC
TGGCTGGGCAGTCGGGATGGATGTGAAGGTGTCCGTCGGCCCGTAGGCAT
CACCTTGTCGCGGAACTACGAGCGAGTAATGCACTACAGCATCCTCACGC
AAAGTGCTCCCTTTGGGATGGACTACCGCGTGATATACATGCGCCACCGC
TCACCGTGGCAGGTGGAGATTAAGGTGATGTCCGAACAGGTGCTCCACAT
TGGATTGTGCCTGCCCAGCTCCTGCAGCTCCGAGGAGGTGAAGCAGCTGG
CCAGGTATTATGTGGCCGGAGATTTGTTCGCCGCGGATGATATGTTCGAT
ATGAAGCCGGAGGTGCTCTACATGAAGGACCTCCGGCTGAGCGAACGCTT
CTACCAGAGGCTGACCTTCCGTTTGGTGGTGGCCGCCATCCTGGTAACCG
GTGCCCTAATGCTCTGCGCCCAGCAAGTGCGGGTGGCCAAGAGGGCCGAT
GAGCCGGATCTGGGTCTGGCTCCGGTGGAATCAGAGTTGTGGCAGGCACT
GGATACCCTCTTGAAGTGGCAGCCTTTTCAGAGTTTCGTGTCCTGTTTCG
ATGTGGCCAATAACTGGCGGAAGATCTCCGCCATGAGGGAGAACCAGCCA
GGCGAGATTCCCATTATGAATGGTCTGCGATCGGTGTGTGCCATCTGGAT
TCTGATCTTCCATGTCGTGTGGTACATGTACTTCACTGTGCACAACAAAA
CGGTACTGATATCCTATGCGGAACAGGTCTTCTTCCAGTACGTCTCCACA
GCTCCACTTCTCGTGGACGTCTTCTTTACCATCAGTGGCTTTTTGCAAAC
GTACAACTTCCTGAGAAATGAGCAGCAGCTGGACGCAGTGCGTCGCAATG
GCCTGTGGGGCAATGTGAAGCTCTTTGGCAAGCTGCTGTTCCATCGCTAC
CTGAGATTGGGTCCTCTCTACTTGGTGGTGATGGGCAGCGTGGACTTGGC
CTTCGCCTACATCGGAGACGTTTCCGTTTTCCACATCAACGAGAGATTCG
ACGAGTTGTGCCCACAGCACTGGTGGAGGAATCTACTCTTCATCCAGAAC
CTCTTCGATCACCGCGAAATGTGCGCCAATTGGAGTTGGAGCCTCGCCTG
CGACATGCAGTTCTTCCTGCTGGCAAACATCGTGCTCTTTATTTACGCCA
AGCATGAAAAGCTAGCCAAGGCAATTACACTCACTGGACTAATGGGCACG
ATAACGTGGTCCTACGGCATTGGAATCGCCAAGAAGTTCGAGTTCTCCTT
CGACTCCACCTATGCGACTGGCACTCAGATATACACGAGTCCCTTTGTAA
GAGTTTTGCCCTATATCGTGGGAGCCATAGCCGCATGGTATTACCAGGAG
CAGCGATTCCAAGTGAGTGAGCTGAGTGAACGCCGGATATGCCGGTGGTG
GCATTTCAGTCTCAAGGTGTTCGTGGGCTGCATCTACTCTACGGTGAAGC
GGGATCTGGGTTACCTTATCACCATATCGCTATTTGTTCTGGGTCGCGCT
CTGTTTTCCCTCACCATTTGCTGGATGATCGTGGGCAGTGCATCGGGTAC
TGGCGTTTGGTGGTCACGCCTGCTGGAGGCCAAGTTCTTTCAGCATTTGA
ACCGCCTGTCCTACGCCATATATCTATTAAATCCCCTGGTGATTGCCCTC
GTTTACAGTCTGACCAGTACGAGCTCTGCAGTTGATCCCTTTCTGCTGAG
CGTCATCTGCTGCGGGTTTACGATGATCGTTTATCTGGCCTCCATCGCCT
TTTCGCTGGCTTTTGAGCTGCCCTACAGCAATCTGTCTAGTTTGCTGCTC
AAGGGAAAACCAAAAACCTCAGCAAGCTTTCTAGACCAT
BO35153.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:01:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30471-RB | 2208 | CG30471-PB | 1..2205 | 17..2221 | 11025 | 100 | Plus |
| CG11353-RB | 2265 | CG11353-PB | 1045..1566 | 1007..1528 | 975 | 79.1 | Plus |
| CG11353-RA | 2265 | CG11353-PA | 1045..1566 | 1007..1528 | 975 | 79.1 | Plus |
| CG11353-RB | 2265 | CG11353-PB | 229..763 | 206..740 | 560 | 73.6 | Plus |
| CG11353-RB | 2265 | CG11353-PB | 1993..2231 | 1958..2196 | 325 | 75.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:01:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30471-RB | 2435 | CG30471-RB | 91..2300 | 12..2221 | 11035 | 100 | Plus |
| CG11353-RB | 3115 | CG11353-RB | 1623..2144 | 1007..1528 | 975 | 79.1 | Plus |
| CG11353-RA | 2910 | CG11353-RA | 1418..1939 | 1007..1528 | 975 | 79.1 | Plus |
| CG11353-RB | 3115 | CG11353-RB | 807..1341 | 206..740 | 560 | 73.6 | Plus |
| CG11353-RB | 3115 | CG11353-RB | 2571..2809 | 1958..2196 | 325 | 75.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:01:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15535590..15536428 | 347..1185 | 4195 | 100 | Plus |
| 2R | 25286936 | 2R | 15536918..15537468 | 1548..2098 | 2740 | 99.8 | Plus |
| 2R | 25286936 | 2R | 15536492..15536861 | 1183..1552 | 1850 | 100 | Plus |
| 2R | 25286936 | 2R | 15535190..15535525 | 12..347 | 1665 | 99.7 | Plus |
| 2R | 25286936 | 2R | 15537524..15537647 | 2098..2221 | 620 | 100 | Plus |
| 3L | 28110227 | 3L | 4537813..4538157 | 1184..1528 | 540 | 77.1 | Plus |
| 3L | 28110227 | 3L | 4537564..4537742 | 1007..1185 | 445 | 83.2 | Plus |
| 3L | 28110227 | 3L | 4536895..4537282 | 353..740 | 365 | 72.9 | Plus |
| 3L | 28110227 | 3L | 4538878..4538964 | 2110..2196 | 210 | 82.8 | Plus |
| 3L | 28110227 | 3L | 4536222..4536363 | 206..347 | 200 | 76.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:01:12 has no hits.
BO35153.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:42 Download gff for
BO35153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30471-RB | 96..2300 | 17..2223 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:29:25 Download gff for
BO35153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30471-RB | 96..2300 | 17..2223 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:29:25 Download gff for
BO35153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15535195..15535525 | 17..347 | 100 | -> | Plus |
| 2R | 15535591..15536428 | 348..1185 | 100 | -> | Plus |
| 2R | 15536495..15536860 | 1186..1551 | 100 | -> | Plus |
| 2R | 15536922..15537468 | 1552..2098 | 100 | -> | Plus |
| 2R | 15537525..15537647 | 2099..2223 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:42 Download gff for
BO35153.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11424000..11424365 | 1186..1551 | 100 | -> | Plus |
| arm_2R | 11422700..11423030 | 17..347 | 100 | -> | Plus |
| arm_2R | 11423096..11423933 | 348..1185 | 100 | -> | Plus |
| arm_2R | 11424427..11424973 | 1552..2098 | 100 | -> | Plus |
| arm_2R | 11425030..11425152 | 2099..2223 | 98 | | Plus |
BO35153.pep Sequence
Translation from 16 to 2239
> BO35153.pep
MEKHWRLVLIISIWILVVNAAVNESTLRRHRYEYGFLNGSLELSPEIIST
DIRGKEAAAIESPHEPHLTRSSVIFGLTKVANESNVTPSCYAHLKQVQRG
ILSRQPWAMKVLDASGTKPSGFVFGQNYWLGSRDGCEGVRRPVGITLSRN
YERVMHYSILTQSAPFGMDYRVIYMRHRSPWQVEIKVMSEQVLHIGLCLP
SSCSSEEVKQLARYYVAGDLFAADDMFDMKPEVLYMKDLRLSERFYQRLT
FRLVVAAILVTGALMLCAQQVRVAKRADEPDLGLAPVESELWQALDTLLK
WQPFQSFVSCFDVANNWRKISAMRENQPGEIPIMNGLRSVCAIWILIFHV
VWYMYFTVHNKTVLISYAEQVFFQYVSTAPLLVDVFFTISGFLQTYNFLR
NEQQLDAVRRNGLWGNVKLFGKLLFHRYLRLGPLYLVVMGSVDLAFAYIG
DVSVFHINERFDELCPQHWWRNLLFIQNLFDHREMCANWSWSLACDMQFF
LLANIVLFIYAKHEKLAKAITLTGLMGTITWSYGIGIAKKFEFSFDSTYA
TGTQIYTSPFVRVLPYIVGAIAAWYYQEQRFQVSELSERRICRWWHFSLK
VFVGCIYSTVKRDLGYLITISLFVLGRALFSLTICWMIVGSASGTGVWWS
RLLEAKFFQHLNRLSYAIYLLNPLVIALVYSLTSTSSAVDPFLLSVICCG
FTMIVYLASIAFSLAFELPYSNLSSLLLKGKPKTSASFLDH
BO35153.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:00:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30471-PB | 735 | CG30471-PB | 1..735 | 1..735 | 3861 | 100 | Plus |
| CG11353-PB | 754 | CG11353-PB | 16..753 | 7..734 | 2599 | 65.3 | Plus |
| CG11353-PA | 754 | CG11353-PA | 16..753 | 7..734 | 2599 | 65.3 | Plus |
| CG12990-PA | 663 | CG12990-PA | 37..654 | 83..731 | 777 | 29.1 | Plus |
| CG32645-PB | 853 | CG32645-PB | 445..853 | 331..736 | 472 | 27.3 | Plus |
