BO35154.complete Sequence
1621 bp assembled on 2014-03-03
GenBank Submission: KX795555
> BO35154.complete
GAAGTTATCAGTCGACATGGAACCAGATCCCAATGGGATAAAAATAGAGC
CCTCACTTGATCAGCAGCAGTACGCCACCCATGTGCTGGCCATCAATGGC
TCCAATGCCCGCCTGCTCATCGAGCATCCCTCAGCTTTGTTGGTACCACT
CTCCTCGCATCACCAGCTGCAATTGCAACAGCAGCAACAACAGCAGCAGC
ACGTACAGCAGCAACATCAACAACAGCAGCAGCAGCATCAGCAACAACAG
CAACAGTTCCAGCAGCAACATCTTCACCAGCAGCAACAGGATCAACTGCA
GTTCCAGCAACAGCATCTCCAGCTTTATGCACCACTGAAGCAACAGCAAT
TGCAGCAGCAGCAATCGCAGCAGCCACCCACTCCATTGGGACCCACCAGC
AGTGCCAGTTCCGCATCCATAACAGGTGCCTCCACCACTGGCCACCAGCA
GAGGTGGAACGAGAGCCCCGAGGCACGCCAGCGCCGTCTGGCCAGAAATG
CTGAAAGGATGCGGGAACGCCGGCAGCGCGAGAGCGAGGAGGAGTATCGC
AAGCGACTACTCCGGAATGCAGAAGCCAATCGCCAGAGACGCCAGAATGA
ATCCGACATAGAGCGGGCCATGCGGCTAGTGAGGAATGCGGCCAGGCAAC
GGCTACGCCGGGCCATGGAGTCGCCGGACCAGAGGGCCAAACGGCTGGCC
AAATTGGCCGAAAGGATGCGCATGTATCGCGCCAGCGAGACGAACGATCA
GCGAAAGCTCCGGCTGGCAGAAATGGCGGCAAGGGCGCGCCAAAGGATCG
CCAATGAGTCACCGGAGGAGCGGAAGGAAAGACTGAGAAAGCTGAACGAT
TATGCCAAAAAGGTCAGAGAAAAGAAGAAGGTACTGAAGCATGTTGTGGT
GCACGGTGGTTCGTCGTCGGTGGTCGTCTCAACGCCGACATCCTCCTCGT
CGTCAACGGACCAGCAGCACCACCACCAGCAGCAGCAGCAGCAACAGCAG
CAACAACAGCAGCAGCAACAACAGCAGCAGGTGCTGGCTGTTGCAGCAGC
AGCCGCAGCAGCGGCGGCAGCCAATTGTACTAACGAACACACTATCAATC
TAAACCAGGCGACCACCACAGCGACGACGACGACAACGGACGAGGCAGGC
ACCCCGCAGCCCGCGGAGGATCAGCAGCATCTGGTGACAGCAGCCGCCTA
TCAGCAACACCAGGCCCTGGCCGGAGTGGAGTATATGGGACAGGGCATGT
TTCTGGCGCCCGGCTCCCTACGTCCACCCATGCAACTGAAGCAGGAGCCA
CAGACGCCGCAGCAGCAGCAGATTACACAGCAGCAGCTGCAGCAGCAGCA
TCAGCGATACACCATCACCGGACAGCAGCAGCAACAGGTTACGGCTGCTC
TGCTCGAGGGCACCGAGCCGGGCAGCATCTTTGTGCAGCAGATCTATGGC
GATGAGGGTGGCAAGGGCACCGCAAAGCTGCTCCAGGCCCATGTGCCGCA
CTTCAGCATCGCCGGTGGCCAGCTGGAACTCTACCCGCACAAATATGCTG
CCAAGAAGCAGGAACTTCAGTTGCAGAGGAATTTGGAATCGAATACAAAT
TCGGCAAGCTTTCTAGACCAT
BO35154.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:01:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14442-RD | 1590 | CG14442-PD | 1..1587 | 17..1603 | 7935 | 100 | Plus |
| CG14442-RA | 3105 | CG14442-PA | 1..1555 | 17..1571 | 7775 | 100 | Plus |
| CG14442-RC | 3027 | CG14442-PC | 1..1015 | 17..1031 | 5075 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:01:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14442-RD | 2983 | CG14442-RD | 1052..2638 | 17..1603 | 7935 | 100 | Plus |
| CG14442-RA | 4658 | CG14442-RA | 1046..2600 | 17..1571 | 7775 | 100 | Plus |
| CG14442-RC | 4562 | CG14442-RC | 1052..2066 | 17..1031 | 5075 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:01:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6692399..6693956 | 1574..17 | 7775 | 99.9 | Minus |
| 3L | 28110227 | 3L | 14027696..14027803 | 288..181 | 210 | 79.6 | Minus |
Blast to na_te.dros performed 2014-11-28 15:01:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6742..7194 | 157..608 | 454 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6887 | 210..377 | 363 | 68.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2434..2679 | 159..398 | 344 | 62.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6898 | 234..425 | 336 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2260..2534 | 180..451 | 286 | 60.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..6938 | 251..482 | 273 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2525 | 260..471 | 268 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2619..2835 | 161..377 | 247 | 62.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1059..1181 | 225..351 | 238 | 67.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1055..1147 | 272..364 | 195 | 67.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2449 | 283..424 | 192 | 62.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1518..1589 | 239..310 | 189 | 73.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6877 | 299..451 | 178 | 61.6 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3192..3342 | 180..347 | 144 | 60.4 | Plus |
BO35154.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:44 Download gff for
BO35154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14442-RD | 1052..2638 | 17..1605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:29:27 Download gff for
BO35154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14442-RD | 1052..2638 | 17..1605 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:29:27 Download gff for
BO35154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6692077..6692113 | 1571..1605 | 94 | <- | Minus |
| X | 6692403..6693956 | 17..1570 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:44 Download gff for
BO35154.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6586110..6586146 | 1571..1605 | 94 | <- | Minus |
| arm_X | 6586436..6587989 | 17..1570 | 100 | | Minus |
BO35154.pep Sequence
Translation from 16 to 1621
> BO35154.pep
MEPDPNGIKIEPSLDQQQYATHVLAINGSNARLLIEHPSALLVPLSSHHQ
LQLQQQQQQQQHVQQQHQQQQQQHQQQQQQFQQQHLHQQQQDQLQFQQQH
LQLYAPLKQQQLQQQQSQQPPTPLGPTSSASSASITGASTTGHQQRWNES
PEARQRRLARNAERMRERRQRESEEEYRKRLLRNAEANRQRRQNESDIER
AMRLVRNAARQRLRRAMESPDQRAKRLAKLAERMRMYRASETNDQRKLRL
AEMAARARQRIANESPEERKERLRKLNDYAKKVREKKKVLKHVVVHGGSS
SVVVSTPTSSSSSTDQQHHHQQQQQQQQQQQQQQQQQQVLAVAAAAAAAA
AANCTNEHTINLNQATTTATTTTTDEAGTPQPAEDQQHLVTAAAYQQHQA
LAGVEYMGQGMFLAPGSLRPPMQLKQEPQTPQQQQITQQQLQQQHQRYTI
TGQQQQQVTAALLEGTEPGSIFVQQIYGDEGGKGTAKLLQAHVPHFSIAG
GQLELYPHKYAAKKQELQLQRNLESNTNSASFLDH
BO35154.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:00:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14442-PD | 529 | CG14442-PD | 1..529 | 1..529 | 2686 | 100 | Plus |
| CG14442-PA | 1034 | CG14442-PA | 1..535 | 1..531 | 2633 | 97.6 | Plus |
| CG14442-PC | 1008 | CG14442-PC | 1..509 | 1..531 | 2471 | 92.7 | Plus |
| CG14442-PE | 958 | CG14442-PE | 1..459 | 1..531 | 1896 | 75.5 | Plus |
| CG14442-PB | 952 | CG14442-PB | 1..453 | 1..531 | 1861 | 74.4 | Plus |
