Clone BO35156 Report

Search the DGRC for BO35156

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:56
Vector:pDNR-Dual
Associated Gene/Transcriptbves-RC
Protein status:BO35156.pep: Imported from assembly
Sequenced Size:1231

Clone Sequence Records

BO35156.complete Sequence

1231 bp assembled on 2013-12-04

GenBank Submission: KX797175

> BO35156.complete
GAAGTTATCAGTCGACATGCCCAGCACGGCGGGCAGTGCAGCTGGCGTTG
GTATGGGCGCCCTGATCAACAGTGCCGGCAGCAGCGCCAGTAGTGTCATG
GGCATTGGCATGGGCAGAGCAGCTGCTACGGGAGCAGGAGCACCAGGCAG
TTCGGGATCTGGAGCAGATGCCTCCGCCGCCGGCACTTTAATCGCCCAGA
GCACGGCGGGAACGAGCGCCGCCAGCAGTGGAACGATCACCTGGGACAAC
AATGGAACCCTGCGATCGATCAATCCCGGCGATTGGTCCATCGAACAGTG
CCTCGGGCCACATCACCTGTACTTTCAGCTCGGCTGGGCCTTTCTCTTCC
TAGCCTTTTTGGCTCCACACGGTCCCTACGGCGCCCTGTGGATGCGTGCC
ATGCTGCTCATTGGCTGCCTGATGATGGGCATGCATGGCTACTTGGTGGC
CTTTGCACCGGACGTCATCCTGTGGTCGGGCATGGGACTTTTTGTCAACT
TCATCTATCTCGTCGTGGTGCTATGCCGGCTGAGGCCTGTGCGATTCGAG
CAGGAAATCGAAGCGGTCTACCTGGCACTTTTCCAGCCGCTGCACGTGAC
GCGCCACCAGTTCAAGAAGGTGCTCAACTGCATGAAGGTGATACGTGCCC
TGAAGTACCAGGAGGTCTACGCCCAGGAGAAGGTCACCAAGGTCGACAGC
CTGTCGCTGGTGCTGAGCGGCAAACTGGTGGTGTCGCAGCATCAGCGCGC
CCTGCACATTGTGTTTCCCCATCAGTTCCTAGACTCGCCAGAATGGTTTG
GCGTCTCGACCGATGACTACTTTCAGGTCTCCATCATGGCCATGGAGGAG
TCGCGGGTGCTGATCTGGCATCGCGACAAGCTCAAATTGTCAATTATGGC
CGAGCCCTTCTTGCAGACCGTCTTCGATCACATTCTGGGCCGGGATGTGG
TCAAGAAGCTGATGCAGGTCACCCAGGTGAGCGAGTCGATAGCCAGCAAT
GGCTTCCTGCCCTCTGGTGGATATGCTGAGGATGCGGAGGACAAGCCCAT
GTTGATACTAAAGAAGAGTGTGGATGTGGGACACGGACTGACGGCCCTGA
TCAACCGGCAGCTACAGGCCCTGCCTAGGATATCGAAGTATTACGATTGC
GCTGGAGATCCGAATTCTTGGCGCCTTGGAAGGATCGATGAAACGGATCA
CGAAACGGCCGTTGCAAGCTTTCTAGACCAT

BO35156.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
bves-RC 1200 CG32513-PC 1..1197 17..1213 5985 100 Plus
bves-RD 1167 CG32513-PD 1..1103 17..1119 5515 100 Plus
bves-RB 1245 CG32513-PB 1..1102 17..1118 5510 100 Plus
bves-RD 1167 CG32513-PD 1102..1164 1151..1213 315 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
bves-RC 3461 CG32513-RC 715..1911 17..1213 5985 100 Plus
bves-RD 3428 CG32513-RD 715..1817 17..1119 5515 100 Plus
bves-RB 3789 CG32513-RB 715..1816 17..1118 5510 100 Plus
bves-RD 3428 CG32513-RD 1816..1878 1151..1213 315 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 21061009..21061559 17..567 2755 100 Plus
X 23542271 X 21075364..21075522 565..723 795 100 Plus
X 23542271 X 21075770..21075924 824..978 775 100 Plus
X 23542271 X 21076039..21076182 975..1118 720 100 Plus
X 23542271 X 21075592..21075696 724..828 525 100 Plus
X 23542271 X 21080779..21080841 1151..1213 315 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:41:18 has no hits.

BO35156.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:45 Download gff for BO35156.complete
Subject Subject Range Query Range Percent Splice Strand
bves-RC 715..1911 17..1215 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:18 Download gff for BO35156.complete
Subject Subject Range Query Range Percent Splice Strand
bves-RC 715..1911 17..1215 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:18 Download gff for BO35156.complete
Subject Subject Range Query Range Percent Splice Strand
X 21061009..21061557 17..565 100 -> Plus
X 21075365..21075522 566..723 100 -> Plus
X 21075592..21075694 724..826 100 -> Plus
X 21075773..21075922 827..976 100 -> Plus
X 21076041..21076182 977..1118 100 -> Plus
X 21080047..21080079 1119..1151 100 -> Plus
X 21080780..21080841 1152..1215 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:45 Download gff for BO35156.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20932036..20932584 17..565 100 -> Plus
arm_X 20946392..20946549 566..723 100 -> Plus
arm_X 20946619..20946721 724..826 100 -> Plus
arm_X 20946800..20946949 827..976 100 -> Plus
arm_X 20947068..20947209 977..1118 100 -> Plus
arm_X 20951074..20951106 1119..1151 100 -> Plus
arm_X 20951807..20951868 1152..1215 96   Plus

BO35156.pep Sequence

Translation from 16 to 1231

> BO35156.pep
MPSTAGSAAGVGMGALINSAGSSASSVMGIGMGRAAATGAGAPGSSGSGA
DASAAGTLIAQSTAGTSAASSGTITWDNNGTLRSINPGDWSIEQCLGPHH
LYFQLGWAFLFLAFLAPHGPYGALWMRAMLLIGCLMMGMHGYLVAFAPDV
ILWSGMGLFVNFIYLVVVLCRLRPVRFEQEIEAVYLALFQPLHVTRHQFK
KVLNCMKVIRALKYQEVYAQEKVTKVDSLSLVLSGKLVVSQHQRALHIVF
PHQFLDSPEWFGVSTDDYFQVSIMAMEESRVLIWHRDKLKLSIMAEPFLQ
TVFDHILGRDVVKKLMQVTQVSESIASNGFLPSGGYAEDAEDKPMLILKK
SVDVGHGLTALINRQLQALPRISKYYDCAGDPNSWRLGRIDETDHETAVA
SFLDH

BO35156.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:17
Subject Length Description Subject Range Query Range Score Percent Strand
bves-PC 399 CG32513-PC 1..399 1..399 2067 100 Plus
bves-PD 388 CG32513-PD 1..388 1..399 1983 97.2 Plus
bves-PB 414 CG32513-PB 1..367 1..367 1889 100 Plus
bves-PA 414 CG32513-PA 1..367 1..367 1889 100 Plus