BO35158.complete Sequence
358 bp assembled on 2013-12-04
GenBank Submission: KX796434
> BO35158.complete
GAAGTTATCAGTCGACATGTTGTTTTTCTGCCCGTCGTGCGGAAATATAT
TGATTATCGAGGAAGACACCAACTGCCATCGCTTCACGTGCAACACCTGC
CCGTACATATCGAAGATCAGGCGCAAGATCTCCACGAAAACCTTTCCACG
CCTCAAGGAGGTGGATCACGTGCTGGGCGGCAAGGCGGCGTGGGAGAACG
TAGACTCCACGGACGCAGAGTGTCCAACGTGCGGCCATAAGCGGGCGTAC
TTTATGCAAATCCAGACGCGGTCGGCGGATGAGCCCATGACCACGTTTTA
CAAGTGCTGCAACCACGAGTGCAACCACACCTGGCGAGACGCAAGCTTTC
TAGACCAT
BO35158.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:40:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33785-RA | 327 | CG33785-PA | 1..324 | 17..340 | 1605 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:40:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33785-RA | 1245 | CG33785-RA | 62..385 | 17..340 | 1605 | 99.7 | Plus |
CG33786-RA | 1245 | CG33786-RA | 62..385 | 17..340 | 1605 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:40:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20643326..20643510 | 340..156 | 925 | 100 | Minus |
2R | 25286936 | 2R | 20643583..20643724 | 158..17 | 695 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:40:46 has no hits.
BO35158.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:33 Download gff for
BO35158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33785-RA | 75..385 | 30..342 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:04 Download gff for
BO35158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33786-RA | 75..385 | 30..342 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:04 Download gff for
BO35158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20643324..20643508 | 158..342 | 98 | <- | Minus |
2R | 20643584..20643711 | 30..157 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:33 Download gff for
BO35158.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16530829..16531013 | 158..342 | 98 | <- | Minus |
arm_2R | 16531089..16531216 | 30..157 | 99 | | Minus |
BO35158.pep Sequence
Translation from 16 to 358
> BO35158.pep
MLFFCPSCGNILIIEEDTNCHRFTCNTCPYISKIRRKISTKTFPRLKEVD
HVLGGKAAWENVDSTDAECPTCGHKRAYFMQIQTRSADEPMTTFYKCCNH
ECNHTWRDASFLDH
BO35158.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33785-PA | 108 | CG33785-PA | 1..108 | 1..108 | 621 | 100 | Plus |
RpII15-PC | 129 | CG3284-PC | 20..129 | 4..108 | 157 | 30.9 | Plus |
RpII15-PB | 129 | CG3284-PB | 20..129 | 4..108 | 157 | 30.9 | Plus |
RpII15-PA | 129 | CG3284-PA | 20..129 | 4..108 | 157 | 30.9 | Plus |