BO35159.complete Sequence
973 bp assembled on 2013-12-04
GenBank Submission: KX798684
> BO35159.complete
GAAGTTATCAGTCGACATGAAGATCTGTGCTCAAATAATTGGAATTATAG
TTTTAGCAAGGCTCCTTAAGGAGGTTGATGGAAAAGGAGAAATTTCAGAC
CTGGAATCTCTGGCCAAGACCGATGCAATGTACACTGCCCTGCTGAAGGA
GATAAATTCAACTTTTCACAAAAGACCGTTGCTGGCAGAAAAAAATGCAG
AGTTCGAAAAGAATTTCCAAACAGTTTTAGTTGCTCTAAACTTAAGCATG
TATGAAATAGCTACCAAAATTGATGTCTACACCGACTTTACAGTTTACAA
TCAAATCCGATTAGAACTCGAAAGGGAAATCTTTAAGAAGCTACAAGTTG
CGGAAAGACTTCAGAAGATGGAAAACCTTATGCCAACGTGTCGCATCTTC
TTTGCCAATCAGCAAGTGCAACTCATTGGCAGTTTCAGTCAATCCAACCT
CATGAAATTGGAAATATTGAATCATCCGGGTCCAGAGTGCGAAAATGTTG
AAGTGCAAAAAATTTTCATCGCGCCAACTTCATCGACTGCCAGGCCCGAT
AACTACGATACAGAGATTCTAAAAGTTTTGGCCAAATACAGGACACGTCC
GTGGGGAAAAAAGACGTATCGGGATTTCGACGAGAAAATATGGAACCTTT
TTATGGCCATAAACAGCGAAGAGCAAACATTTAAAAAGAACGCATTAGCC
GCATTCAAAAAATATGACGAAGATCGGGCCATTTTGGACAAAGCATTGGC
ACACCGAATTGCAGAATTCGAGAAACAAATTCCGCATGAGACAAATCCGT
GCAGGGTCGATCTAATTCGCTTGAAAAAAGAACTGGGACGCGCAATGTTT
GAAACTACGCAGAAAAAGCACAACAGTTTGGTCGCTACGAACTATGTAAA
GACTTGTCTCAATAATCAAATAAAATTGTTCTTGGCAATGAATGATTTAA
CATTGGCAAGCTTTCTAGACCAT
BO35159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:40:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33325-RB | 942 | CG33325-PB | 1..939 | 17..955 | 4695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:40:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33325-RB | 965 | CG33325-RB | 24..962 | 17..955 | 4695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:40:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8678957..8679809 | 955..103 | 4265 | 100 | Minus |
3R | 32079331 | 3R | 8679951..8680011 | 77..17 | 305 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 14:40:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
jockey | 5020 | jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). | 2927..2999 | 150..220 | 116 | 67.6 | Plus |
BO35159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:34 Download gff for
BO35159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33325-RB | 24..962 | 17..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:06 Download gff for
BO35159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33325-RB | 24..962 | 17..957 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:06 Download gff for
BO35159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8678955..8679808 | 104..957 | 99 | <- | Minus |
3R | 8679860..8679885 | 78..103 | 100 | <- | Minus |
3R | 8679951..8680011 | 17..77 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:34 Download gff for
BO35159.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4504677..4505530 | 104..957 | 99 | <- | Minus |
arm_3R | 4505582..4505607 | 78..103 | 100 | <- | Minus |
arm_3R | 4505673..4505733 | 17..77 | 100 | | Minus |
BO35159.pep Sequence
Translation from 16 to 973
> BO35159.pep
MKICAQIIGIIVLARLLKEVDGKGEISDLESLAKTDAMYTALLKEINSTF
HKRPLLAEKNAEFEKNFQTVLVALNLSMYEIATKIDVYTDFTVYNQIRLE
LEREIFKKLQVAERLQKMENLMPTCRIFFANQQVQLIGSFSQSNLMKLEI
LNHPGPECENVEVQKIFIAPTSSTARPDNYDTEILKVLAKYRTRPWGKKT
YRDFDEKIWNLFMAINSEEQTFKKNALAAFKKYDEDRAILDKALAHRIAE
FEKQIPHETNPCRVDLIRLKKELGRAMFETTQKKHNSLVATNYVKTCLNN
QIKLFLAMNDLTLASFLDH
BO35159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33325-PB | 313 | CG33325-PB | 1..313 | 1..313 | 1595 | 100 | Plus |