Clone BO35159 Report

Search the DGRC for BO35159

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG33325-RB
Protein status:BO35159.pep: Imported from assembly
Sequenced Size:973

Clone Sequence Records

BO35159.complete Sequence

973 bp assembled on 2013-12-04

GenBank Submission: KX798684

> BO35159.complete
GAAGTTATCAGTCGACATGAAGATCTGTGCTCAAATAATTGGAATTATAG
TTTTAGCAAGGCTCCTTAAGGAGGTTGATGGAAAAGGAGAAATTTCAGAC
CTGGAATCTCTGGCCAAGACCGATGCAATGTACACTGCCCTGCTGAAGGA
GATAAATTCAACTTTTCACAAAAGACCGTTGCTGGCAGAAAAAAATGCAG
AGTTCGAAAAGAATTTCCAAACAGTTTTAGTTGCTCTAAACTTAAGCATG
TATGAAATAGCTACCAAAATTGATGTCTACACCGACTTTACAGTTTACAA
TCAAATCCGATTAGAACTCGAAAGGGAAATCTTTAAGAAGCTACAAGTTG
CGGAAAGACTTCAGAAGATGGAAAACCTTATGCCAACGTGTCGCATCTTC
TTTGCCAATCAGCAAGTGCAACTCATTGGCAGTTTCAGTCAATCCAACCT
CATGAAATTGGAAATATTGAATCATCCGGGTCCAGAGTGCGAAAATGTTG
AAGTGCAAAAAATTTTCATCGCGCCAACTTCATCGACTGCCAGGCCCGAT
AACTACGATACAGAGATTCTAAAAGTTTTGGCCAAATACAGGACACGTCC
GTGGGGAAAAAAGACGTATCGGGATTTCGACGAGAAAATATGGAACCTTT
TTATGGCCATAAACAGCGAAGAGCAAACATTTAAAAAGAACGCATTAGCC
GCATTCAAAAAATATGACGAAGATCGGGCCATTTTGGACAAAGCATTGGC
ACACCGAATTGCAGAATTCGAGAAACAAATTCCGCATGAGACAAATCCGT
GCAGGGTCGATCTAATTCGCTTGAAAAAAGAACTGGGACGCGCAATGTTT
GAAACTACGCAGAAAAAGCACAACAGTTTGGTCGCTACGAACTATGTAAA
GACTTGTCTCAATAATCAAATAAAATTGTTCTTGGCAATGAATGATTTAA
CATTGGCAAGCTTTCTAGACCAT

BO35159.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:40:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG33325-RB 942 CG33325-PB 1..939 17..955 4695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG33325-RB 965 CG33325-RB 24..962 17..955 4695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:40:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8678957..8679809 955..103 4265 100 Minus
3R 32079331 3R 8679951..8680011 77..17 305 100 Minus
Blast to na_te.dros performed 2014-11-28 14:40:50
Subject Length Description Subject Range Query Range Score Percent Strand
jockey 5020 jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). 2927..2999 150..220 116 67.6 Plus

BO35159.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:34 Download gff for BO35159.complete
Subject Subject Range Query Range Percent Splice Strand
CG33325-RB 24..962 17..957 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:06 Download gff for BO35159.complete
Subject Subject Range Query Range Percent Splice Strand
CG33325-RB 24..962 17..957 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:06 Download gff for BO35159.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8678955..8679808 104..957 99 <- Minus
3R 8679860..8679885 78..103 100 <- Minus
3R 8679951..8680011 17..77 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:34 Download gff for BO35159.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4504677..4505530 104..957 99 <- Minus
arm_3R 4505582..4505607 78..103 100 <- Minus
arm_3R 4505673..4505733 17..77 100   Minus

BO35159.pep Sequence

Translation from 16 to 973

> BO35159.pep
MKICAQIIGIIVLARLLKEVDGKGEISDLESLAKTDAMYTALLKEINSTF
HKRPLLAEKNAEFEKNFQTVLVALNLSMYEIATKIDVYTDFTVYNQIRLE
LEREIFKKLQVAERLQKMENLMPTCRIFFANQQVQLIGSFSQSNLMKLEI
LNHPGPECENVEVQKIFIAPTSSTARPDNYDTEILKVLAKYRTRPWGKKT
YRDFDEKIWNLFMAINSEEQTFKKNALAAFKKYDEDRAILDKALAHRIAE
FEKQIPHETNPCRVDLIRLKKELGRAMFETTQKKHNSLVATNYVKTCLNN
QIKLFLAMNDLTLASFLDH

BO35159.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG33325-PB 313 CG33325-PB 1..313 1..313 1595 100 Plus