BO35161.complete Sequence
757 bp assembled on 2013-12-04
GenBank Submission: KX796032
> BO35161.complete
GAAGTTATCAGTCGACATGGTTGTGGGCCTGATTTTGCGAGCGGGCGTTG
TCTATGCTGTGGTAATGGTCACCAAGAACTACGGCGTGTGGGAATCTCCA
AACAAGACGCAAGATGTGTACGATGAAACCGTGGAGCGCATCGAACCCTA
CGCCGATCAGGCGCGACGTAAACTAAATATATGCCCGCCTAGGCCGCCAC
CGGAGGGAGAATGGTCCTTCTTTGGCATCTACTACTACAACAAATTAGTT
AAATCGGTTTTCGACTTACTAAGCGTCTTTCCCGCTGGACTAGCTGCGTT
TTTGGAGAAAGTACCAAGCTATGTCAACGCTTTTAACGAAACCATTCAAA
AGTACATTAAGGAGAGCCAGTCTAAGAAGAAAGAAATAACGATATCCAAG
GGACAGCTGGACGAGACTCCTCTGGTCAGACCTCCCGGACTGGTGCCACC
GCATTGCAAAGACAAGAACTGTCCGAAGGCTCCTCTGATTCCACCAGGAT
GCGACCGGAACAGGGATAGCTTTATCTACGAGCCGCGTTTACCCAAGAAG
CCACCGTGCGAGTGCGCCAAGTGCAAGCAACGTCAGGCGGAGAATTGGAA
GGACAACAAACGCAAGTGCCCCAGAATACCGAGCAGTGAAGCCAAGTGTA
GATGTGGAGAGGGTCCCCAGTCGGAAGCCCGCTCGGAGCCCATCAAATCG
TGCAAACAGTGCCGAAAGACGCCTCGAGAAACCGCTACCGCAAGCTTTCT
AGACCAT
BO35161.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43328-RB | 726 | CG43328-PB | 1..723 | 17..739 | 3615 | 100 | Plus |
| CG43328-RA | 726 | CG43328-PA | 1..723 | 17..739 | 3615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43328-RB | 874 | CG43328-RB | 64..786 | 17..739 | 3615 | 100 | Plus |
| CG43328-RA | 1526 | CG43328-RA | 716..1438 | 17..739 | 3615 | 100 | Plus |
| CG43327-RA | 1526 | CG43327-RA | 716..1438 | 17..739 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17032575..17033297 | 739..17 | 3615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:41:27 has no hits.
BO35161.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:49 Download gff for
BO35161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43327-RA | 631..1353 | 17..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:24 Download gff for
BO35161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43327-RA | 716..1438 | 17..741 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:24 Download gff for
BO35161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17032573..17033297 | 17..741 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:49 Download gff for
BO35161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12920078..12920802 | 17..741 | 99 | | Minus |
BO35161.pep Sequence
Translation from 16 to 757
> BO35161.pep
MVVGLILRAGVVYAVVMVTKNYGVWESPNKTQDVYDETVERIEPYADQAR
RKLNICPPRPPPEGEWSFFGIYYYNKLVKSVFDLLSVFPAGLAAFLEKVP
SYVNAFNETIQKYIKESQSKKKEITISKGQLDETPLVRPPGLVPPHCKDK
NCPKAPLIPPGCDRNRDSFIYEPRLPKKPPCECAKCKQRQAENWKDNKRK
CPRIPSSEAKCRCGEGPQSEARSEPIKSCKQCRKTPRETATASFLDH
BO35161.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43328-PB | 241 | CG43328-PB | 1..241 | 1..241 | 1315 | 100 | Plus |
| CG43328-PA | 241 | CG43328-PA | 1..241 | 1..241 | 1315 | 100 | Plus |
| CG7603-PA | 122 | CG7603-PA | 1..109 | 1..109 | 156 | 28.4 | Plus |
