BO35166.complete Sequence
577 bp assembled on 2013-12-04
GenBank Submission: KX798816
> BO35166.complete
GAAGTTATCAGTCGACATGGATCCACATAGTGCGGACAACTGCAAGTGCC
ACAAGCAGACGCAGCCGGCACAGCAGACGTTAAGCGACATGGACTTCGAT
CGAGGCATTTGGAATGCAGCTATCTATAACGAAGTGGAGCGTGTAAGAGA
GTTTATCAAGAAGGGCCAGTCGATGGCTCGCGATGACTGCGACTATACGG
CTCTGCACTATGCGGCCCGCAATGGGAACGAGCCCATCTGCAAGCTGCTT
CTCGACGAGGGCAAGGCAGACGTGAATGCTGTGACCAAAGCAGGAGCCAC
CGCGCTGCATCGTGCAGCCATGATGGGCCACTTGGAAATCGTGAAGCTAC
TGGTCGAGCACAAGGCTAATCTTCTGCTGCAGGACGAGAGCGGACAGACC
GCTTTGCATCGAGCAGTGATGCGGGGCCACCTGGAGGTGTGTCGCATTCT
GCTGGCAAAGGAGCCAACACTTAAGCTGGTCAAGGATAAAAAGGACAAAA
TTGCATTTGAGTACATCATGGAGAACGCCAATGATGATTTTAAGCTGCTG
CTGAAGCCCGCAAGCTTTCTAGACCAT
BO35166.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44001-RE | 546 | CG44001-PE | 1..543 | 17..559 | 2715 | 100 | Plus |
CG44001-RD | 546 | CG44001-PD | 1..543 | 17..559 | 2715 | 100 | Plus |
CG44001-RC | 546 | CG44001-PC | 1..543 | 17..559 | 2715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44001-RE | 2431 | CG44001-RE | 1299..1841 | 17..559 | 2715 | 100 | Plus |
CG44001-RD | 2415 | CG44001-RD | 1283..1825 | 17..559 | 2715 | 100 | Plus |
CG44001-RC | 2281 | CG44001-RC | 1149..1691 | 17..559 | 2715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5047542..5047775 | 326..559 | 1170 | 100 | Plus |
2L | 23513712 | 2L | 5047271..5047480 | 118..327 | 1050 | 100 | Plus |
2L | 23513712 | 2L | 5047104..5047206 | 17..119 | 515 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:41:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbif\P-element_O | 2986 | Dbif\P-element_O P_O 2986bp Derived from X71634. | 1447..1530 | 523..445 | 110 | 64.3 | Minus |
BO35166.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:52 Download gff for
BO35166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44001-RC | 1149..1691 | 17..561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:30 Download gff for
BO35166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44001-RC | 1149..1691 | 17..561 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:30 Download gff for
BO35166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5047104..5047206 | 17..119 | 100 | -> | Plus |
2L | 5047273..5047479 | 120..326 | 100 | -> | Plus |
2L | 5047543..5047775 | 327..561 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:52 Download gff for
BO35166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5047543..5047775 | 327..561 | 99 | | Plus |
arm_2L | 5047104..5047206 | 17..119 | 100 | -> | Plus |
arm_2L | 5047273..5047479 | 120..326 | 100 | -> | Plus |
BO35166.pep Sequence
Translation from 16 to 577
> BO35166.pep
MDPHSADNCKCHKQTQPAQQTLSDMDFDRGIWNAAIYNEVERVREFIKKG
QSMARDDCDYTALHYAARNGNEPICKLLLDEGKADVNAVTKAGATALHRA
AMMGHLEIVKLLVEHKANLLLQDESGQTALHRAVMRGHLEVCRILLAKEP
TLKLVKDKKDKIAFEYIMENANDDFKLLLKPASFLDH
BO35166.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44001-PE | 181 | CG44001-PE | 1..181 | 1..181 | 946 | 100 | Plus |
CG44001-PD | 181 | CG44001-PD | 1..181 | 1..181 | 946 | 100 | Plus |
CG44001-PC | 181 | CG44001-PC | 1..181 | 1..181 | 946 | 100 | Plus |
CG44001-PB | 181 | CG44001-PB | 1..181 | 1..181 | 946 | 100 | Plus |
CG44001-PA | 181 | CG44001-PA | 1..181 | 1..181 | 946 | 100 | Plus |