BO35167.complete Sequence
451 bp assembled on 2013-12-04
GenBank Submission: KX797147
> BO35167.complete
GAAGTTATCAGTCGACATGTCCTGGTCAAGTGCACTAATCAAAGATATCT
CGAAACCAGAAAATTTGATCATTTCGTCAGAAATCGCAGTGGTCATAGCA
GACAAGTTTCCCAAGGCGCAGCATCACTACTTGGTGCTACCATTGGCCGA
CATTCCCAGCATCTTTCACTTGAACCGGAGCCATCTGTCGCTTTTGGAGG
AGCTGCATCTGCTGGCCAGGAACGTTGTGGAAGTGAAAGGAGTCCGGTGG
CAGGACTTCAACGTGGGATTTCACGCGGAGCCGAGCATGCAAAGGCTCCA
CCTGCACGTCATCTCCAAGGACTTCGTATCAACAAGCCTGAAGACCAAGA
AGCATTGGAACTCATTCAACACCGAGCTGTTTGTGCCCTACACAAGTAAG
GCTATTAGAACACGGCGCAGGCTACAGGCTTCAGCAAGCTTTCTAGACCA
T
BO35167.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5316-RA | 420 | CG5316-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
| CG5316-RB | 1989 | CG5316-PB | 1..379 | 17..395 | 1895 | 100 | Plus |
| CG5316-RC | 1989 | CG5316-PC | 1..379 | 17..395 | 1895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5316-RA | 2610 | CG5316-RA | 203..619 | 17..433 | 2085 | 100 | Plus |
| CG5316-RB | 2483 | CG5316-RB | 203..581 | 17..395 | 1895 | 100 | Plus |
| CG5316-RC | 2376 | CG5316-RC | 96..474 | 17..395 | 1895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19403893..19404156 | 170..433 | 1320 | 100 | Plus |
| 3R | 32079331 | 3R | 19403670..19403822 | 17..169 | 765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:41:45 has no hits.
BO35167.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:54 Download gff for
BO35167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5316-RA | 203..619 | 17..435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:32 Download gff for
BO35167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5316-RA | 203..619 | 17..435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:32 Download gff for
BO35167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19403670..19403822 | 17..169 | 100 | -> | Plus |
| 3R | 19403893..19404156 | 170..435 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:54 Download gff for
BO35167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15229392..15229544 | 17..169 | 100 | -> | Plus |
| arm_3R | 15229615..15229878 | 170..435 | 99 | | Plus |
BO35167.pep Sequence
Translation from 16 to 451
> BO35167.pep
MSWSSALIKDISKPENLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIF
HLNRSHLSLLEELHLLARNVVEVKGVRWQDFNVGFHAEPSMQRLHLHVIS
KDFVSTSLKTKKHWNSFNTELFVPYTSKAIRTRRRLQASASFLDH
BO35167.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5316-PA | 139 | CG5316-PA | 1..139 | 1..139 | 713 | 100 | Plus |
| CG5316-PB | 662 | CG5316-PB | 1..126 | 1..126 | 654 | 100 | Plus |
| CG5316-PC | 662 | CG5316-PC | 1..126 | 1..126 | 654 | 100 | Plus |
| CG5316-PB | 662 | CG5316-PB | 232..351 | 7..125 | 221 | 38.3 | Plus |
| CG5316-PC | 662 | CG5316-PC | 232..351 | 7..125 | 221 | 38.3 | Plus |
| CG5316-PD | 572 | CG5316-PD | 142..261 | 7..125 | 221 | 38.3 | Plus |
| CG5316-PD | 572 | CG5316-PD | 1..36 | 91..126 | 193 | 100 | Plus |
