Clone BO35169 Report

Search the DGRC for BO35169

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptPtpmeg-RG
Protein status:BO35169.pep: Imported from assembly
Sequenced Size:2956

Clone Sequence Records

BO35169.complete Sequence

2956 bp assembled on 2014-03-03

GenBank Submission: KX798746

> BO35169.complete
GAAGTTATCAGTCGACATGTTTGAGCGCTTCCGACTGAACAACCTGACTA
GAACCTTTCGCCTGCGAGGAGGCGGCCCAGAACTGGCGCGCGACAAGAAG
ACCCCGCAACGGCAGCAATGCGTCACCGTCCTATTCCTAGATGACATCAC
GCACACCTTTCGGATCGAGAAACGTGCGAAAGGCTCTGAACTCCTGGATC
AGGTCTTTCAGTATCTCGAGTTATCCGAAAGGGACTACTTTGGCCTACTA
TTTCCACAGAAGCCAGGTGACGTCGTGAGATGGGTTGATGCTCAGAAGCA
GTTTAAGAAGCAATGCAGCAGCGTTTCCCTCGACAACGATGCCGTACCAT
TATTAGAGTTTAGGGTTAAGTTTTTTGTAAGCGATCCCAGCCGACTGCAG
GAGGAGTTCACACGCTACCAGTTCTATCTGCAGATCAAGCGCAACATTCT
ACTGGGCAAGCTGCCCTGCTCCAGCAACACCCAGTGCCTGCTTGCCAGCT
ACACTGTGCAATCCGAGTTGGGTGACTTTAACGCATTAGAACACCAGCCG
GGCTATCTGAGCGGAATGCAGCTGCTCTGCGACCAGACAACGGAGGCGGA
GCGGAAGGTTGGAGAACTGCACAAGTTGCACCGTGGGCAGCTACCGGCGG
ACGCGGAGTACAACTACCTGGAGCACGCTAAGCGATTGGAGCTATACGGG
ATTGACCTGCACAGGGCCACCGACTCCAACGGCAAGGAGCTGCAGCTGGG
CGTATCGGCCGTCGGACTGCTCGTCTTCCAGCATTCATTGCGCGTGAACA
CTTTCTCGTGGAGCAAGATGGTCAAGGTGTCGTTCAAGCGTAAGGACTTC
TTCATCCAGTTGCGCCGCGAGCCCAGCGAGAACTACGATACTTTGCTGGG
CTTTGGGATGAGCAGCCACAAGCACGCCAAGGCGCTGTGGAAGTCCTGCG
TGGAGCACCACAGCTTCTTCCGCCTAAAGCGACCACACCGCCTCTCACGC
TTCCTCAATATCAGTTTGGGTAGCAAGTTTTACTACTCTGGACGCACAGA
GCTACAGGCTGTGCAGGAGTCCAAACAGCGTGGTCGCATTCACAAGGTAT
TTGTGCGCTCGCCGAGCAAGCGGCTTCTGGGAGCCGCCGGCGGTGTGGGA
ACGTCAGGCTCCTCGGGCGGTACGCCTATGCAGCAGCACAGCGGCTCCGA
GAGCGCCAATTCCCACAACAACGGAAAGCCAGCCGGCGCAGGAACCATAC
TGACCATTACAAAGACAAGCCGCCCGCACGATAACAAGGTCACCTCCAAG
GAGGCCGATTCCATGCCGCGCAAGGCGTGGGAGCAGCAGAGCGACGAGTA
TGACATTCAGCTCGACGTCGGTTTTATTGAACAGTGCACCCGACGCTTCG
AGTCTGCATCCCCGTCGCCCATGCCGCCCGCCTACAGCTCCGGCCAGCAC
AGTCCAATTCTACTGCCAACAACCATCGCGGACGCCGTGGGTCATCAGCA
GCCGGAAAGCGGCAGCGACCTCATCACCATTCGTTTGCAGGCCGACGAGC
AGGGACGCTATGGTTTCAACGTGAAGGGTGGAGTGGATTTGAGCCTGCCC
GTTCAGGTGTCAAAAGTGGTACCCCATACGCCCGCTGATCGTTGCACTCC
GCGAGTCTGCGAGGGCGACGAGGTACTCATGATTAATGGCCGGGATGTGC
ACGGCCTGCGTCACGAGCAGGTGGTGGCCATGATTCGTGATTGCCGTCAT
CAAGCCAGCGGCGAATTGCTACTGACGGTGCGGCCCCAGCGCTCGGCCCC
TCTGCTCCTTGAGGAGGAGCCGTTGTACCAGTACGTCCCGGAGAGCGATG
AGATCGGATCACACTCTAATCTGCTCGATGGGGATGCTTTGTTTACCCAG
AGCCTGCTGCTGCTCAGCGATGGCTTGGCGTCTGGCGCCCTGTTGGCGCA
GTATGAGCTCATGTACAGGAAGAACCCGGATCTGGCCATTACTGAGGCTC
GGAAGCCGGCGAACGCGCCCAAAAACCGATACCGAGACATATCACCATAT
GACTGCACCCGGGTATCTCTGGTCAACTCGCTCACAGGCGACTACATCAA
CGCCAACTACGTAAACATGGAGATTCCCGGCGGAGCGGTAAACCGATATA
TTGCCACCCAGGGACCTCTGGCCAGCACCACGACGGACTTTTGGCGCATG
GTACAGCAAGAGAGCAGTCATCTCCTGGTGATGCTAACGACCGTAATGGA
GTCTGGTCGCCAGAAATGCCATCAGTATTGGCCGGTGACGGGTGAGGAGC
TTCAGCTGGCGGAGGGATTCTCGGTGCGATGCCTTAGCGAGAAACCGGAC
GAGACAGGTAGTTTTGTCTTCCGCGAGTTTGTTCTGAAGGACAAGCACGA
GCAGCGACACATCCACCACATGCAGTACTTGGCCTGGCCAGATCACTGTG
TGCCCTCCGATCCTAATCTTTTCCTAGAGTTTACGGAGCGGGTGCGTGCC
GCTCGAAACCGCACGCTCCTTCAGGAGATCGAGGAGAGTCTGAAGCAGGT
GCGCCTGATGGATGCCGATGCGGATGCCGACGAGAACGGCGGACTGATGC
GCGAGCGCAAGTGTGCGGCCAGCAACGGAGCCACTCCTGAGGACGAGACG
CCGGTCTCGACAAGCGTGCATCAGTGCATCAGTGCAGCCAATCCACCTGT
GATTGTCCACTGCTCGGCGGGAATAGGACGTACTGGAGTGCTCATACTGA
TGGACACTGCGCTGGCTTTGATGGAGGCTCGAGAACCGGTGTATCCGTTG
GACATTGTGCGCACCATGCGCGATCAGCGTGCCTGCATGGTGCAGAATGT
GAGCCAGTACCGCTTCGTGTGCGAGTGCATCTGCGCCGCCTACATGAAGA
TCTCACGCAGCAGTGCGGCCATTAACGACGACGAGGATGCAAGCTTTCTA
GACCAT

BO35169.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
Ptpmeg-RK 2925 CG1228-PK 1..2922 17..2938 14610 100 Plus
Ptpmeg-RJ 2925 CG1228-PJ 1..2922 17..2938 14610 100 Plus
Ptpmeg-RI 2925 CG1228-PI 1..2922 17..2938 14610 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:01:39
Subject Length Description Subject Range Query Range Score Percent Strand
Ptpmeg-RK 4079 CG1228-RK 631..3553 16..2938 14615 100 Plus
Ptpmeg-RJ 4028 CG1228-RJ 580..3502 16..2938 14615 100 Plus
Ptpmeg-RI 3596 CG1228-RI 459..3381 16..2938 14615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 352838..353687 513..1362 4250 100 Plus
3L 28110227 3L 353761..354446 1363..2048 3430 100 Plus
3L 28110227 3L 354500..355127 2049..2676 3140 100 Plus
3L 28110227 3L 355199..355376 2674..2851 890 100 Plus
3L 28110227 3L 351625..351778 16..169 770 100 Plus
3L 28110227 3L 352624..352771 365..512 725 99.3 Plus
3L 28110227 3L 352298..352407 168..277 550 100 Plus
3L 28110227 3L 352475..352568 277..370 470 100 Plus
3L 28110227 3L 355437..355524 2851..2938 440 100 Plus
Blast to na_te.dros performed on 2014-11-28 15:01:37 has no hits.

BO35169.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:24:51 Download gff for BO35169.complete
Subject Subject Range Query Range Percent Splice Strand
Ptpmeg-RI 466..3381 23..2940 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:29:35 Download gff for BO35169.complete
Subject Subject Range Query Range Percent Splice Strand
Ptpmeg-RI 466..3381 23..2940 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:29:35 Download gff for BO35169.complete
Subject Subject Range Query Range Percent Splice Strand
3L 351632..351778 23..169 100 -> Plus
3L 352300..352407 170..277 100 -> Plus
3L 352476..352568 278..370 100 -> Plus
3L 352630..352771 371..512 100 -> Plus
3L 352838..353687 513..1362 100 -> Plus
3L 353761..354446 1363..2048 100 -> Plus
3L 354500..355124 2049..2673 100 -> Plus
3L 355199..355376 2674..2851 100 -> Plus
3L 355438..355524 2852..2940 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:24:51 Download gff for BO35169.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 351632..351778 23..169 100 -> Plus
arm_3L 352300..352407 170..277 100 -> Plus
arm_3L 352476..352568 278..370 100 -> Plus
arm_3L 352630..352771 371..512 100 -> Plus
arm_3L 352838..353687 513..1362 100 -> Plus
arm_3L 353761..354446 1363..2048 100 -> Plus
arm_3L 354500..355124 2049..2673 100 -> Plus
arm_3L 355199..355376 2674..2851 100 -> Plus
arm_3L 355438..355524 2852..2940 97   Plus

BO35169.pep Sequence

Translation from 16 to 2956

> BO35169.pep
MFERFRLNNLTRTFRLRGGGPELARDKKTPQRQQCVTVLFLDDITHTFRI
EKRAKGSELLDQVFQYLELSERDYFGLLFPQKPGDVVRWVDAQKQFKKQC
SSVSLDNDAVPLLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRNILLGKLP
CSSNTQCLLASYTVQSELGDFNALEHQPGYLSGMQLLCDQTTEAERKVGE
LHKLHRGQLPADAEYNYLEHAKRLELYGIDLHRATDSNGKELQLGVSAVG
LLVFQHSLRVNTFSWSKMVKVSFKRKDFFIQLRREPSENYDTLLGFGMSS
HKHAKALWKSCVEHHSFFRLKRPHRLSRFLNISLGSKFYYSGRTELQAVQ
ESKQRGRIHKVFVRSPSKRLLGAAGGVGTSGSSGGTPMQQHSGSESANSH
NNGKPAGAGTILTITKTSRPHDNKVTSKEADSMPRKAWEQQSDEYDIQLD
VGFIEQCTRRFESASPSPMPPAYSSGQHSPILLPTTIADAVGHQQPESGS
DLITIRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEG
DEVLMINGRDVHGLRHEQVVAMIRDCRHQASGELLLTVRPQRSAPLLLEE
EPLYQYVPESDEIGSHSNLLDGDALFTQSLLLLSDGLASGALLAQYELMY
RKNPDLAITEARKPANAPKNRYRDISPYDCTRVSLVNSLTGDYINANYVN
MEIPGGAVNRYIATQGPLASTTTDFWRMVQQESSHLLVMLTTVMESGRQK
CHQYWPVTGEELQLAEGFSVRCLSEKPDETGSFVFREFVLKDKHEQRHIH
HMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDA
DADADENGGLMRERKCAASNGATPEDETPVSTSVHQCISAANPPVIVHCS
AGIGRTGVLILMDTALALMEAREPVYPLDIVRTMRDQRACMVQNVSQYRF
VCECICAAYMKISRSSAAINDDEDASFLDH

BO35169.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:00:58
Subject Length Description Subject Range Query Range Score Percent Strand
Ptpmeg-PK 974 CG1228-PK 1..974 1..974 5090 100 Plus
Ptpmeg-PJ 974 CG1228-PJ 1..974 1..974 5090 100 Plus
Ptpmeg-PI 974 CG1228-PI 1..974 1..974 5090 100 Plus
Ptpmeg-PH 974 CG1228-PH 1..974 1..974 5090 100 Plus
Ptpmeg-PG 974 CG1228-PG 1..974 1..974 5090 100 Plus