BO35173.complete Sequence
229 bp assembled on 2013-12-04
GenBank Submission: KX798645
> BO35173.complete
GAAGTTATCAGTCGACATGGTTGACCTCACCGACGCCGGCTCGCCGTTCC
AGCAATCCATTCCCGACTTCGCCTTCTACGTGCCGGCAATTGTTGTTTTT
ACCCTGGCAGCTCTCTTTGGCTACAAGCTGTACAAATCCCTGACGGAAAA
GGAGCTCAAGAAGCAGGAGAAACTGAAGAGCAAGCAACAGAAGAAGGCCA
AGAAGTCAAACGCAAGCTTTCTAGACCAT
BO35173.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42336-RB | 198 | CG42336-PB | 1..195 | 17..211 | 975 | 100 | Plus |
CG42336-RD | 489 | CG42336-PD | 383..486 | 108..211 | 520 | 100 | Plus |
CG42336-RF | 423 | CG42336-PF | 319..420 | 110..211 | 510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42336-RB | 509 | CG42336-RB | 164..360 | 15..211 | 985 | 100 | Plus |
CG42336-RD | 707 | CG42336-RD | 455..558 | 108..211 | 520 | 100 | Plus |
CG42336-RF | 901 | CG42336-RF | 651..752 | 110..211 | 510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11294685..11294788 | 211..108 | 520 | 100 | Minus |
2R | 25286936 | 2R | 11297262..11297357 | 110..15 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:41:55 has no hits.
BO35173.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:58 Download gff for
BO35173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42336-RB | 166..360 | 17..213 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:36 Download gff for
BO35173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42336-RB | 166..360 | 17..213 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:36 Download gff for
BO35173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11294682..11294785 | 111..213 | 98 | <- | Minus |
2R | 11297262..11297355 | 17..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:58 Download gff for
BO35173.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7184767..7184860 | 17..110 | 100 | | Minus |
arm_2R | 7182187..7182290 | 111..213 | 98 | <- | Minus |
BO35173.pep Sequence
Translation from 16 to 229
> BO35173.pep
MVDLTDAGSPFQQSIPDFAFYVPAIVVFTLAALFGYKLYKSLTEKELKKQ
EKLKSKQQKKAKKSNASFLDH
BO35173.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42336-PB | 65 | CG13211-PA | 1..65 | 1..65 | 324 | 100 | Plus |
CG42336-PF | 140 | CG42336-PF | 83..140 | 8..65 | 184 | 67.2 | Plus |
CG42336-PE | 140 | CG42336-PE | 83..140 | 8..65 | 184 | 67.2 | Plus |
CG42336-PD | 162 | CG42336-PD | 125..162 | 28..65 | 174 | 92.1 | Plus |
CG42336-PC | 138 | CG13211-PB | 92..138 | 22..65 | 170 | 78.7 | Plus |