BO35183.complete Sequence
511 bp assembled on 2013-12-04
GenBank Submission: KX794505
> BO35183.complete
GAAGTTATCAGTCGACATGACCGACCTCAACGAGCTGATGGGATCCCCTT
TTGTGCGTGTGAAGCTTGTGGCCTTTGTGCACTTCTTCTTCATCTCGAAT
GCCATGCTTGGCAGTTGGGGCCACGGGGCGTATGAATTCTACAACTTTCT
ATTCCTGATCGCCATGTTCTGGTCGATGCACAGCAAGGACTCCGTCGAAG
CGATTCAAACGGCGCTCGTCATCAACGCTTCTAGCATTTTTTTTGATATA
GTCAGCATTTCTCTTCATTTCGGCATTATGAATGGCTGGGCCGTTGCGTT
CAGCATCATCAATCTGATACTGCGACCGGTGAGCGTGGCCCTGCTCTACA
AGGAGTTCAACACGAGGGGCGGCACACTGCCGACGGGATCGGTCTTCCCA
ACTAGCCAGCAGCGCAGCTATCAGGACATCGATCGGCCCACACAGCCCAC
ACCGACCAATTCGCAGCCCGGTCCGAATGTGGCCAGCATTTTCGCAAGCT
TTCTAGACCAT
BO35183.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:41:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32638-RB | 480 | CG32638-PB | 1..477 | 17..493 | 2370 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:41:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32638-RB | 1573 | CG32638-RB | 496..973 | 16..493 | 2375 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:41:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13123476..13123687 | 493..282 | 1045 | 99.5 | Minus |
| X | 23542271 | X | 13126067..13126216 | 212..63 | 750 | 100 | Minus |
| X | 23542271 | X | 13123774..13123844 | 281..211 | 355 | 100 | Minus |
| X | 23542271 | X | 13128251..13128299 | 64..16 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:41:50 has no hits.
BO35183.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:00:56 Download gff for
BO35183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32638-RB | 497..973 | 17..495 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:34 Download gff for
BO35183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32638-RB | 497..973 | 17..495 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:34 Download gff for
BO35183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13123474..13123687 | 282..495 | 98 | <- | Minus |
| X | 13123774..13123843 | 212..281 | 100 | <- | Minus |
| X | 13126068..13126214 | 65..211 | 100 | <- | Minus |
| X | 13128251..13128298 | 17..64 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:00:56 Download gff for
BO35183.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13017507..13017720 | 282..495 | 98 | <- | Minus |
| arm_X | 13017807..13017876 | 212..281 | 100 | <- | Minus |
| arm_X | 13020101..13020247 | 65..211 | 100 | <- | Minus |
| arm_X | 13022284..13022331 | 17..64 | 100 | | Minus |
BO35183.pep Sequence
Translation from 16 to 511
> BO35183.pep
MTDLNELMGSPFVRVKLVAFVHFFFISNAMLGSWGHGAYEFYNFLFLIAM
FWSMHSKDSVEAIQTALVINASSIFFDIVSISLHFGIMNGWAVAFSIINL
ILRPVSVALLYKEFNTRGGTLPTGSVFPTSQQRSYQDIDRPTQPTPTNSQ
PGPNVASIFASFLDH
BO35183.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32638-PB | 159 | CG32638-PB | 1..159 | 1..159 | 825 | 100 | Plus |
