BO35193.complete Sequence
556 bp assembled on 2013-12-04
GenBank Submission: KX794282
> BO35193.complete
GAAGTTATCAGTCGACATGCGTTCCTTACCGATGTTTTGGCGCATGGCCG
AGGAGATGGCACGGATGCCACGCCTCTCCTCGCCCTTTCACGCCTTCTTC
CACGAGCCGCCCGTTTGGAGTGTGGCGCTACCGAGGAACTGGCAGCAGAT
TGCCCGCTGGCAGGAGCAGGAGTTCGCTCCGCCGGCCACCGTCAACAAGG
ATGGCTACAAACTCACCCTGGACGTCAAGGACTACAGCGAGCTAAAGGTC
AAGGTGCTGGACGAGAGCGTTGTCCTGGTGGAGGGAAAATCAGAGCAGCA
GGAGGCCGAACAAGGTGGCTATAGCTCCAGGCACTTCCTCCGCCGCTTCG
TCCTGCCGGAAGGATACGAGGCGGACAAGGTGACCTCAACGCTGAGCAGC
GACGGCGTCCTGACCATCAGTGTGCCCAATCCTCCAGGCGTGCAGGAGAC
ACTCAAGGAGCGTGAGGTGACCATCGAGCAGACTGGCGAGCCGGCAAAGA
AGTCCGCCGAGGAGCCAAATGACAAAGCCGCCAGTCAGGCAAGCTTTCTA
GACCAT
BO35193.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:42:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp22-RB | 525 | CG4460-PB | 1..522 | 17..538 | 2610 | 100 | Plus |
Hsp22-RA | 525 | CG4460-PA | 1..522 | 17..538 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp67Bb-RB | 1900 | CG4456-RB | 1187..1708 | 17..538 | 2610 | 100 | Plus |
Hsp22-RB | 968 | CG4460-RB | 255..776 | 17..538 | 2610 | 100 | Plus |
Hsp22-RA | 1900 | CG4460-RA | 1187..1708 | 17..538 | 2610 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9374251..9374772 | 17..538 | 2610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:42:23 has no hits.
BO35193.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:01:08 Download gff for
BO35193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp67Bb-RB | 1187..1708 | 17..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:46 Download gff for
BO35193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp22-RA | 1187..1708 | 17..540 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:46 Download gff for
BO35193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9374251..9374772 | 17..540 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:01:08 Download gff for
BO35193.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9367351..9367872 | 17..540 | 99 | | Plus |
BO35193.pep Sequence
Translation from 16 to 556
> BO35193.pep
MRSLPMFWRMAEEMARMPRLSSPFHAFFHEPPVWSVALPRNWQQIARWQE
QEFAPPATVNKDGYKLTLDVKDYSELKVKVLDESVVLVEGKSEQQEAEQG
GYSSRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLKERE
VTIEQTGEPAKKSAEEPNDKAASQASFLDH
BO35193.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp22-PB | 174 | CG4460-PB | 1..174 | 1..174 | 906 | 100 | Plus |
Hsp22-PA | 174 | CG4460-PA | 1..174 | 1..174 | 906 | 100 | Plus |
Hsp23-PB | 186 | CG4463-PB | 1..180 | 1..174 | 287 | 39.7 | Plus |
Hsp23-PA | 186 | CG4463-PA | 1..180 | 1..174 | 287 | 39.7 | Plus |
Hsp26-PB | 208 | CG4183-PB | 68..182 | 43..157 | 251 | 44.4 | Plus |