Clone BO35193 Report

Search the DGRC for BO35193

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:351
Well:93
Vector:pDNR-Dual
Associated Gene/TranscriptHsp22-RA
Protein status:BO35193.pep: Imported from assembly
Sequenced Size:556

Clone Sequence Records

BO35193.complete Sequence

556 bp assembled on 2013-12-04

GenBank Submission: KX794282

> BO35193.complete
GAAGTTATCAGTCGACATGCGTTCCTTACCGATGTTTTGGCGCATGGCCG
AGGAGATGGCACGGATGCCACGCCTCTCCTCGCCCTTTCACGCCTTCTTC
CACGAGCCGCCCGTTTGGAGTGTGGCGCTACCGAGGAACTGGCAGCAGAT
TGCCCGCTGGCAGGAGCAGGAGTTCGCTCCGCCGGCCACCGTCAACAAGG
ATGGCTACAAACTCACCCTGGACGTCAAGGACTACAGCGAGCTAAAGGTC
AAGGTGCTGGACGAGAGCGTTGTCCTGGTGGAGGGAAAATCAGAGCAGCA
GGAGGCCGAACAAGGTGGCTATAGCTCCAGGCACTTCCTCCGCCGCTTCG
TCCTGCCGGAAGGATACGAGGCGGACAAGGTGACCTCAACGCTGAGCAGC
GACGGCGTCCTGACCATCAGTGTGCCCAATCCTCCAGGCGTGCAGGAGAC
ACTCAAGGAGCGTGAGGTGACCATCGAGCAGACTGGCGAGCCGGCAAAGA
AGTCCGCCGAGGAGCCAAATGACAAAGCCGCCAGTCAGGCAAGCTTTCTA
GACCAT

BO35193.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:42:24
Subject Length Description Subject Range Query Range Score Percent Strand
Hsp22-RB 525 CG4460-PB 1..522 17..538 2610 100 Plus
Hsp22-RA 525 CG4460-PA 1..522 17..538 2610 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:25
Subject Length Description Subject Range Query Range Score Percent Strand
Hsp67Bb-RB 1900 CG4456-RB 1187..1708 17..538 2610 100 Plus
Hsp22-RB 968 CG4460-RB 255..776 17..538 2610 100 Plus
Hsp22-RA 1900 CG4460-RA 1187..1708 17..538 2610 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9374251..9374772 17..538 2610 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:42:23 has no hits.

BO35193.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:01:08 Download gff for BO35193.complete
Subject Subject Range Query Range Percent Splice Strand
Hsp67Bb-RB 1187..1708 17..540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:46 Download gff for BO35193.complete
Subject Subject Range Query Range Percent Splice Strand
Hsp22-RA 1187..1708 17..540 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:46 Download gff for BO35193.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9374251..9374772 17..540 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:01:08 Download gff for BO35193.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9367351..9367872 17..540 99   Plus

BO35193.pep Sequence

Translation from 16 to 556

> BO35193.pep
MRSLPMFWRMAEEMARMPRLSSPFHAFFHEPPVWSVALPRNWQQIARWQE
QEFAPPATVNKDGYKLTLDVKDYSELKVKVLDESVVLVEGKSEQQEAEQG
GYSSRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLKERE
VTIEQTGEPAKKSAEEPNDKAASQASFLDH

BO35193.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:43
Subject Length Description Subject Range Query Range Score Percent Strand
Hsp22-PB 174 CG4460-PB 1..174 1..174 906 100 Plus
Hsp22-PA 174 CG4460-PA 1..174 1..174 906 100 Plus
Hsp23-PB 186 CG4463-PB 1..180 1..174 287 39.7 Plus
Hsp23-PA 186 CG4463-PA 1..180 1..174 287 39.7 Plus
Hsp26-PB 208 CG4183-PB 68..182 43..157 251 44.4 Plus