Clone BO35203 Report

Search the DGRC for BO35203

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:352
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG7512-RB
Protein status:BO35203.pep: Imported from assembly
Sequenced Size:1654

Clone Sequence Records

BO35203.complete Sequence

1654 bp assembled on 2013-12-04

GenBank Submission: KX799644

> BO35203.complete
GAAGTTATCAGTCGACATGGAGTCCAGCAGCAGTGTCGTCGCGGAGATGG
AGTCCACCAGTCCAAGTGATCACGGCCAGCCCACCCAGATCACCTCCATC
GATGGCTTCTTCAATCGGAAACGGGGGCGTCCGCCAAAGAATCGCTTTGT
GGAGGTCTACAAGAGCGCCCAGCACTCGCCGCAGGCCATCTTCACCAGCT
TTAAGCTGGAGAGAAGCGAATATTCCGGCCCAGGAGCACGTCTTCCCGGT
GGCTCATCGTCAACGGTGGCCACTGCAGAGGATCGTTTGTCTCTAGCGGA
TCACGATGGATCAGCAACTGATCTCACACCTAGTCGCTACCGGAAACGGG
GTCGTGTTTGGGCCCCAACATCGTCTTTGGAGCAGCCTAGCAAGAGAATT
GTCAATCAGCCAACCCACTTTGGAGCGAGAAGTGAGACAGAGTCTCGGAG
TAGCCGCCATGAGTCTTTAGCCCAGCCCACCTTACAGCCCTCAGAGCCTT
TAGAAACAAACTCGTCGACGAATTTATCAAGCACAATTTTGGATAAAGTT
TCAGTTGTTCGAGCGGCGGGAACTTTTTATCCGGAGAATGCGAATTCAGC
TGCCCAAGGGGAAACGCCGGAAGTGGTTAGTTCGAGATACAATAGTCGCC
AGGAGTCGAACGACTTGGAGGTGGACCAGCCGGAGGATCTGAGCATGCGA
CCATCTCTGCCGGAAGCCACTGCCACACCGGCGGTAGTGGGACCAGCTCT
GAATATGAATCTGTTGCAGTTTAAGCAGCTGATCGATTTGTACCAGCGAC
AGGTGCTGTTGCCCAGCTTTCTGGCGGCAGCCAGTCAACCGTTGGCATTA
CCGGGTTCAGCAGCAGGTCCTGGAGTTTCAGGGCCTCTTCTGGACATGCG
CATTTTGCTTGAGAATGCCGCTCAACAGAAGCTAATGCTGCTCAATGCAG
CCGCAAGTGCAACGGCAAGTGCAGTGGCAGCCACAACAATCAACTCCGGT
CAAAGGACTGCGGCGAAACGTAACCGGGATCACGACATTCCGAGTGGCTA
TCTAAAATTCCGCTTCAACGAGGACTGTGGATTCGAGAGATGTGGCTACC
GGAATCACCAGTCGCACTTCCACTGCAACCGGCGAGATTGCCACTATAGT
TTCTGCGACAAGACCCGCTTTGTGCAACATACGGCGCGTCATGAGCGAAT
GGACACGTTGATGGGTGATGATTTTCGCCAATTCCGAGCCAACATGCAAT
GCGGAGTGGCCAGCTGCGGTTATGCCACTGCAAGTGGTGCAGCCACGGAG
ACGAATCACCTAAGCAGGATAGATCCCACAGAGGCGGTAACGGCATCCTC
GCGGAAAACTTCGCACTTTCACTGCCGCAAGTGTGATTATGTGTGCACGG
ATTCGAACAAGGTGGTGGCCCATCGAAGATTGCATCTTCGCCAGGACTAT
GTGCGGAATGCTGGCTTCCGCAAGGTGGGCGGAAACGAGCAGTGCGATTC
TCCCGGCTGCTCCTACGCCCAACGGCACACCCACTACCATTGCGTCACCT
GCGACGGCGGAGTCCTTTCACGAGCACAACTGGCAGCCCACAAACACCGG
ACAGGCTTTCCCAAACAGGAGGCGGATACCACACCCGCAAGCTTTCTAGA
CCAT

BO35203.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:42:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG7512-RB 1623 CG7512-PB 1..1620 17..1636 8100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:42:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7512-RB 1958 CG7512-RB 194..1814 16..1636 8105 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:42:26
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11517607..11518376 553..1322 3850 100 Plus
3L 28110227 3L 11518445..11518760 1321..1636 1580 100 Plus
3L 28110227 3L 11517095..11517403 167..475 1545 100 Plus
3L 28110227 3L 11514863..11515014 16..167 760 100 Plus
3L 28110227 3L 11517471..11517552 473..554 410 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:42:28 has no hits.

BO35203.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-12-04 10:01:09 Download gff for BO35203.complete
Subject Subject Range Query Range Percent Splice Strand
CG7512-RB 195..1814 17..1638 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:20:47 Download gff for BO35203.complete
Subject Subject Range Query Range Percent Splice Strand
CG7512-RB 195..1814 17..1638 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:20:47 Download gff for BO35203.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11514864..11515013 17..166 100 -> Plus
3L 11517095..11517403 167..475 100 -> Plus
3L 11517474..11517552 476..554 100 -> Plus
3L 11517609..11518376 555..1322 100 -> Plus
3L 11518447..11518760 1323..1638 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-12-04 10:01:09 Download gff for BO35203.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11507964..11508113 17..166 100 -> Plus
arm_3L 11510195..11510503 167..475 100 -> Plus
arm_3L 11510574..11510652 476..554 100 -> Plus
arm_3L 11510709..11511476 555..1322 100 -> Plus
arm_3L 11511547..11511860 1323..1638 99   Plus

BO35203.pep Sequence

Translation from 16 to 1654

> BO35203.pep
MESSSSVVAEMESTSPSDHGQPTQITSIDGFFNRKRGRPPKNRFVEVYKS
AQHSPQAIFTSFKLERSEYSGPGARLPGGSSSTVATAEDRLSLADHDGSA
TDLTPSRYRKRGRVWAPTSSLEQPSKRIVNQPTHFGARSETESRSSRHES
LAQPTLQPSEPLETNSSTNLSSTILDKVSVVRAAGTFYPENANSAAQGET
PEVVSSRYNSRQESNDLEVDQPEDLSMRPSLPEATATPAVVGPALNMNLL
QFKQLIDLYQRQVLLPSFLAAASQPLALPGSAAGPGVSGPLLDMRILLEN
AAQQKLMLLNAAASATASAVAATTINSGQRTAAKRNRDHDIPSGYLKFRF
NEDCGFERCGYRNHQSHFHCNRRDCHYSFCDKTRFVQHTARHERMDTLMG
DDFRQFRANMQCGVASCGYATASGAATETNHLSRIDPTEAVTASSRKTSH
FHCRKCDYVCTDSNKVVAHRRLHLRQDYVRNAGFRKVGGNEQCDSPGCSY
AQRHTHYHCVTCDGGVLSRAQLAAHKHRTGFPKQEADTTPASFLDH

BO35203.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:49:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG7512-PB 540 CG7512-PB 1..540 1..540 2830 100 Plus
cas-PC 691 CG2102-PC 301..477 335..528 203 25.1 Plus
cas-PA 793 CG2102-PA 403..579 335..528 203 25.1 Plus