BO35217.complete Sequence
1162 bp assembled on 2014-07-07
GenBank Submission: KX793773
> BO35217.complete
GAAGTTATCAGTCGACATGGGAAGGATCTTTGGCGGGGATTTTGGCTCCG
TCGAACCGGGCAAGAGTGAAACTGTCTCCCTGGTCTGGCCCACTGTGTCT
CTGTACAACCGTGTGGGCAGCTGCCCCATTCTAATCTCAGCCACAAGTGC
CCACGCTACGGATGCAGTGGCAACCGCGAGGCAGGTGCTGCACTTTGACA
CCCGCTTTGAGACCCTGGATCCGCACGGCAACAAGCTGCGCCGGCGGAAG
GATTACAAGGACTGTCGCAACTGGGACAAGGATTACCTGCGCAACTGCAC
ACCGCTGAACTGTGAGGAGCGTTACTTTGGGAAACGGAGCTTTTTCAATA
GGGAAACGGAACAGTGCGAACCGGTGACTGATTGCTCGGCCCCAGGCGAG
TACTACGACATCTTCAGCAACGAGCGCGTCGATCCTGGCAATTTCGTGTC
CGAGGAGGAGCTGGACCTCATTAAGCAAGGAAAGTTCGACTTTAATTTTT
TGGATTTGCGGGGGCCACCATCGCAGCATGAGCCGAAAGCCAACAAAGCG
CTTCCTTACAAGAAAAATACCAGGCCAACAAGGCACTTTGTCCATTCCAA
GCATGAGAAGTCAGATGATTGCGACAATTTGCGTAAGCTAACCCTGGCCG
ATTTTAACGACTGCTTTCAGCATTTGCAGGATGGTCAGTCCGAGCCGGTC
GCAGTTGAACCCACAATCGAGAAGAAAATCAAGAAAAAATCGCCATTTGA
GGTGCCCATGCTAACGCAGCTCTATTACGACTGGTATCTTCCTTTAAGGA
GCGATAGCTGGGGGGAAGGCGGAGAAATCGGTGCCATAGGTGATCCCAGT
CCACAAAATGTCTCATCGGGATCGGAACCCCTCATCACGTGGATCGGCAA
GCTGGATTGGAAGGGCTGGCTGTTCCTGATTCTCAGAGGAAGCTTTTTCA
TCTTATTGCTAATTGTGTTTCAGGTTTTCGCCACTCTGACGGCCTATTTT
ATAGTGTGTCTATTTGTCTATGGATTTATGGAACTGTATGGCTTGTGGAC
TAGTGACGATGCACCCGAGACATTTATGTTGGACTCCAGTTCTCAATCCA
CCGCCTACAATCTCGTCACCACAGAAAGTTTGATGTCACATCGAGCAAGC
TTTCTAGACCAT
BO35217.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:10:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31279-RB | 1365 | CG31279-PB | 235..1362 | 17..1144 | 5640 | 100 | Plus |
| CG31279-RE | 1176 | CG31279-PE | 235..1164 | 17..949 | 4585 | 99.7 | Plus |
| CG31279-RD | 1338 | CG31279-PD | 235..1164 | 17..949 | 4585 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:10:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31279-RB | 1482 | CG31279-RB | 251..1378 | 17..1144 | 5640 | 100 | Plus |
| CG31279-RC | 1485 | CG31279-RC | 251..1381 | 17..1144 | 5255 | 98 | Plus |
| CG31279-RE | 1454 | CG31279-RE | 251..1180 | 17..949 | 4585 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:10:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16431281..16431707 | 97..523 | 2135 | 100 | Plus |
| 3R | 32079331 | 3R | 16432114..16432540 | 523..949 | 2135 | 100 | Plus |
| 3R | 32079331 | 3R | 16432599..16432793 | 950..1144 | 975 | 100 | Plus |
| 3R | 32079331 | 3R | 16431111..16431191 | 17..97 | 405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:10:23 has no hits.
BO35217.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-07 10:51:43 Download gff for
BO35217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31279-RB | 251..1378 | 17..1146 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:32:55 Download gff for
BO35217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31279-RB | 251..1378 | 17..1146 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:32:55 Download gff for
BO35217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16431111..16431191 | 17..97 | 100 | -> | Plus |
| 3R | 16431282..16431707 | 98..523 | 100 | -> | Plus |
| 3R | 16432115..16432540 | 524..949 | 100 | -> | Plus |
| 3R | 16432599..16432793 | 950..1146 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-07 10:51:43 Download gff for
BO35217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12256833..12256913 | 17..97 | 100 | -> | Plus |
| arm_3R | 12257004..12257429 | 98..523 | 100 | -> | Plus |
| arm_3R | 12257837..12258262 | 524..949 | 100 | -> | Plus |
| arm_3R | 12258321..12258515 | 950..1146 | 98 | | Plus |
BO35217.pep Sequence
Translation from 16 to 1162
> BO35217.pep
MGRIFGGDFGSVEPGKSETVSLVWPTVSLYNRVGSCPILISATSAHATDA
VATARQVLHFDTRFETLDPHGNKLRRRKDYKDCRNWDKDYLRNCTPLNCE
ERYFGKRSFFNRETEQCEPVTDCSAPGEYYDIFSNERVDPGNFVSEEELD
LIKQGKFDFNFLDLRGPPSQHEPKANKALPYKKNTRPTRHFVHSKHEKSD
DCDNLRKLTLADFNDCFQHLQDGQSEPVAVEPTIEKKIKKKSPFEVPMLT
QLYYDWYLPLRSDSWGEGGEIGAIGDPSPQNVSSGSEPLITWIGKLDWKG
WLFLILRGSFFILLLIVFQVFATLTAYFIVCLFVYGFMELYGLWTSDDAP
ETFMLDSSSQSTAYNLVTTESLMSHRASFLDH
BO35217.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31279-PB | 454 | CG31279-PB | 79..454 | 1..376 | 2037 | 100 | Plus |
| CG31279-PD | 445 | CG31279-PD | 79..445 | 1..376 | 1966 | 97.6 | Plus |
| CG31279-PE | 391 | CG31279-PE | 79..391 | 1..314 | 1694 | 99 | Plus |
| CG31279-PC | 391 | CG31279-PC | 79..391 | 1..314 | 1694 | 99 | Plus |
| CG31279-PG | 129 | CG31279-PG | 1..129 | 248..376 | 689 | 100 | Plus |
